RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TMEM155Q4W5P6 130 aa27.81■■■□□ 2.04
CSNK1E-204ENST00000403904 METAP1DQ6UB28 335 aaPredicted RBP27.81■■■□□ 2.04
CSNK1E-204ENST00000403904 LYPD2Q6UXB3 125 aa27.81■■■□□ 2.04
CSNK1E-204ENST00000403904 OR51T1Q8NGJ9 327 aa27.81■■■□□ 2.04
CSNK1E-204ENST00000403904 DYNC2LI1Q8TCX1 351 aa27.81■■■□□ 2.04
CSNK1E-204ENST00000403904 SELENOIQ9C0D9 397 aa27.81■■■□□ 2.04
CSNK1E-204ENST00000403904 TMEM272A0A1B0GTI8 110 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 AMY2BP19961 511 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 RANBP1P43487 201 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 GABRA2P47869 451 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 PLA2G7Q13093 441 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 ZNF146Q15072 292 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 PDCD1Q15116 288 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 CCL13Q99616 98 aa27.8■■■□□ 2.04
CSNK1E-204ENST00000403904 CEACAM18A8MTB9 384 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 TNFRSF13BO14836 293 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 PRDX2P32119 198 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 CAPZA1P52907 286 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 RBM11P57052 281 aaKnown RBP27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 SPIN3Q5JUX0 258 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 DCDC5Q6ZRR9 648 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 OR2W3Q7Z3T1 314 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 CD177Q8N6Q3 437 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 ZNF222Q9UK12 451 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 TEX15Q9BXT5 2789 aa27.79■■■□□ 2.04
CSNK1E-204ENST00000403904 IGHV4-61A0A0C4DH41 118 aa27.78■■■□□ 2.04
CSNK1E-204ENST00000403904 LDLRAD4O15165 306 aa27.78■■■□□ 2.04
CSNK1E-204ENST00000403904 SPICQ8N5J4 248 aa27.78■■■□□ 2.04
CSNK1E-204ENST00000403904 LGALS14Q8TCE9 139 aa27.78■■■□□ 2.04
CSNK1E-204ENST00000403904 MRPS24Q96EL2 167 aaKnown RBP27.78■■■□□ 2.04
CSNK1E-204ENST00000403904 TMEM59Q9BXS4 323 aa27.78■■■□□ 2.04
CSNK1E-204ENST00000403904 GEMIN2O14893 280 aaKnown RBP27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 CLDND2Q8NHS1 167 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 BATF3Q9NR55 127 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 METRNQ9UJH8 293 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 PCDHB10Q9UN67 800 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 A0A1B0GW55 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 TMPRSS2O15393 492 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 NDUFA2O43678 99 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 HAND1O96004 215 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L2P0CJ85 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L3P0CJ86 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L4P0CJ87 422 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L5P0CJ88 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L6P0CJ89 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L7P0CJ90 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 ZNF182P17025 639 aaPredicted RBP27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 SCN1BQ07699 218 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 TAF9Q16594 264 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 NHLRC3Q5JS37 347 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4L9Q6RFH8 374 aaPredicted RBP27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 OR5H6Q8NGV6 325 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DCUN1D5Q9BTE7 237 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 ZNF581Q9P0T4 197 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 DUX4Q9UBX2 424 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 FBLN5Q9UBX5 448 aa27.77■■■□□ 2.04
CSNK1E-204ENST00000403904 ITPR3Q14573 2671 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 OTOGQ6ZRI0 2925 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 ADAM20O43506 726 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 TMEM127O75204 238 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 EFNB2P52799 333 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 RPS27AP62979 156 aaKnown RBP27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 ATPAF1Q5TC12 328 aaPredicted RBP27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 ZNF788Q6ZQV5 615 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 Q96M66 194 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 ABRACLQ9P1F3 81 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 GLS2Q9UI32 602 aa27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 ZNF469Q96JG9 3925 aaPredicted RBP27.76■■■□□ 2.03
CSNK1E-204ENST00000403904 RNF223E7ERA6 249 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 SH2D1BO14796 132 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 SOX6P35712 828 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 IKZF1Q13422 519 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 IL13RA2Q14627 380 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 FAM216BQ8N7L0 139 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 GAFA1Q96PS6 74 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 RAB22AQ9UL26 194 aa27.75■■■□□ 2.03
CSNK1E-204ENST00000403904 RPS2P15880 293 aaKnown RBP27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 GABRR1P24046 479 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 Q6P435 159 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 NICN1Q9BSH3 213 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 MRI1Q9BV20 369 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 REG4Q9BYZ8 158 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 DNTTIP1Q9H147 329 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 LPAR5Q9H1C0 372 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 ZNF665Q9H7R5 613 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 PATZ1Q9HBE1 687 aaKnown RBP27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 CTSZQ9UBR2 303 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 MAB21L2Q9Y586 359 aa27.74■■■□□ 2.03
CSNK1E-204ENST00000403904 NKX6-3A6NJ46 265 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 OR7C1O76099 320 aaPredicted RBP27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 OR2H2O95918 312 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 SELLP14151 372 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 ZNF44P15621 663 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 USF1P22415 310 aaPredicted RBP27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 COL10A1Q03692 680 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 ZNRF1Q8ND25 227 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 KCTD12Q96CX2 325 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 SDSLQ96GA7 329 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 CCDC59Q9P031 241 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 KAAG1Q9UBP8 84 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms