RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PRDX2P32119 198 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 TMBIM6P55061 237 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 SEC61A1P61619 476 aaKnown RBP13.29□□□□□ -0.28
HMGA1-204ENST00000401473 P2RY14Q15391 338 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 DGUOKQ16854 277 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 PIGYQ3MUY2 71 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 DCDC5Q6ZRR9 648 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 MUC20Q8N307 709 aaPredicted RBP13.29□□□□□ -0.28
HMGA1-204ENST00000401473 NDNFQ8TB73 568 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
HMGA1-204ENST00000401473 BANF2Q9H503 90 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 PATZ1Q9HBE1 687 aaKnown RBP13.29□□□□□ -0.28
HMGA1-204ENST00000401473 RHOFQ9HBH0 211 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 OR14J1Q9UGF5 321 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 STEAP1Q9UHE8 339 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 MAB21L2Q9Y586 359 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 SONP18583 2426 aaKnown RBP13.28□□□□□ -0.28
HMGA1-204ENST00000401473 KNG1P01042 644 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 IL1AP01583 271 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 IGHV2-5P01817 119 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 SELLP14151 372 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 GABRA2P47869 451 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 LOXL1Q08397 574 aaPredicted RBP13.28□□□□□ -0.28
HMGA1-204ENST00000401473 PLA2G7Q13093 441 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 UNC119Q13432 240 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 C2orf76Q3KRA6 126 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 SFXN4Q6P4A7 337 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF841Q6ZN19 808 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF788Q6ZQV5 615 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 FGFRL1Q8N441 504 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 ZNRF1Q8ND25 227 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 OR51T1Q8NGJ9 327 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 FAM46BQ96A09 425 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 BARHL1Q9BZE3 327 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 KAAG1Q9UBP8 84 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 DAPK2Q9UIK4 370 aa13.28□□□□□ -0.28
HMGA1-204ENST00000401473 NDUFA2O43678 99 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF780AO75290 641 aaPredicted RBP13.27□□□□□ -0.28
HMGA1-204ENST00000401473 CSTBP04080 98 aaKnown RBP13.27□□□□□ -0.28
HMGA1-204ENST00000401473 ARSBP15848 533 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 SERPINB10P48595 397 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 SPCS2Q15005 226 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 RAB11BQ15907 218 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 OSR2Q8N2R0 312 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 SPICQ8N5J4 248 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 FAM216BQ8N7L0 139 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 RAB2BQ8WUD1 216 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 FAM3DQ96BQ1 224 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 ISOC1Q96CN7 298 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 GAFA1Q96PS6 74 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 LIN7BQ9HAP6 207 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 GHRLQ9UBU3 117 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 ST3GAL6Q9Y274 331 aa13.27□□□□□ -0.28
HMGA1-204ENST00000401473 DPPA5A6NC42 116 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 SMAD7O15105 426 aaKnown RBP13.27□□□□□ -0.29
HMGA1-204ENST00000401473 ADAM20O43506 726 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 PAHP00439 452 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 GTF2F2P13984 249 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 KCNJ8Q15842 424 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 COX4I2Q96KJ9 171 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 ZNF665Q9H7R5 613 aa13.27□□□□□ -0.29
HMGA1-204ENST00000401473 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 TMEM14DPA8MWL7 114 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 F5H0A9 414 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-204ENST00000401473 H3BMQ9 156 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 GEMIN2O14893 280 aaKnown RBP13.26□□□□□ -0.29
HMGA1-204ENST00000401473 LDLRAD4O15165 306 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 CRTAPO75718 401 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-204ENST00000401473 BPNT1O95861 308 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 MGMTP16455 207 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 GPR176Q14439 515 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 Q6P435 159 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 SLC25A46Q96AG3 418 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 SDSLQ96GA7 329 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 CYYR1Q96J86 154 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 DCSTAMPQ9H295 470 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 MIOXQ9UGB7 285 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 DSCAML1Q8TD84 2053 aa13.26□□□□□ -0.29
HMGA1-204ENST00000401473 PSPNO60542 156 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 HAND1O96004 215 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 UBBP0CG47 229 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 RPS2P15880 293 aaKnown RBP13.25□□□□□ -0.29
HMGA1-204ENST00000401473 ZFP36P26651 326 aaKnown RBP13.25□□□□□ -0.29
HMGA1-204ENST00000401473 RBM11P57052 281 aaKnown RBP13.25□□□□□ -0.29
HMGA1-204ENST00000401473 COL10A1Q03692 680 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 TAF9Q16594 264 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 NHLRC3Q5JS37 347 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SPIN3Q5JUX0 258 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SELENOIQ9C0D9 397 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SHARPINQ9H0F6 387 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 DNTTIP1Q9H147 329 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 OR5V1Q9UGF6 321 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 TMEM272A0A1B0GTI8 110 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 DVL1O14640 695 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SIGLEC5O15389 551 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 PHF1O43189 567 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms