RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TO15178 435 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PAPLNO95428 1278 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 SLC2A10O95528 541 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 SEMG1P04279 462 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 TRAPPC2P0DI81 140 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 TRAPPC2BP0DI82 140 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A1P53007 311 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 ATXN7L3Q14CW9 347 aaPredicted RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 ZNF674Q2M3X9 581 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 RPS26P11Q5JNZ5 115 aaPredicted RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 ETV3LQ6ZN32 361 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 YIPF6Q96EC8 236 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 COX14Q96I36 57 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 TMEM101Q96IK0 257 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 C4orf45Q96LM5 186 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 LRRC3BQ96PB8 259 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 CXCL16Q9H2A7 254 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 GSTO2Q9H4Y5 243 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 P4HTMQ9NXG6 502 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 WSB2Q9NYS7 404 aaPredicted RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 OSGIN2Q9Y236 505 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 RNF115Q9Y4L5 304 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.43□□□□□ -2.021e-6■■■■□ 25.3
CHD9-202ENST00000398510 TRBV5-4A0A0C4DH59 114 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 FAM74A7A6NL05 159 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 H3BRM9 83 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 K7ESM1 405 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 FGF17O60258 216 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 OR4A8P0C604 315 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 STAG3L3P0CL85 134 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 MGMTP16455 207 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 MAS1LP35410 378 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 OR10K1Q8NGX5 313 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PRR7Q8TB68 274 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 TSPAN32Q96QS1 320 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PAAF1Q9BRP4 392 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 SIRT7Q9NRC8 400 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 ZNF275Q9NSD4 429 aaPredicted RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 COA4Q9NYJ1 87 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PCOLCE2Q9UKZ9 415 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 CCL21O00585 134 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 TMPRSS2O15393 492 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 ZNF688P0C7X2 276 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PAX1P15863 534 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 ZP3P21754 424 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 NME2P22392 152 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 HOXD3P31249 432 aaPredicted RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 POLR2IP36954 125 aaKnown RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 UBE2KP61086 200 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 RIGQ13278 110 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 ASAH1Q13510 395 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 Q1RN00 199 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 OR52M1Q8NGK5 317 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 OR4Q3Q8NH05 313 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 ZMYND19Q96E35 227 aaPredicted RBP2.43□□□□□ -2.02
CHD9-202ENST00000398510 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 RPS10P5Q9NQ39 176 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 CMC2Q9NRP2 79 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 HSPB8Q9UJY1 196 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 PXMP4Q9Y6I8 212 aa2.43□□□□□ -2.02
CHD9-202ENST00000398510 RIF1Q5UIP0 2472 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 A0A0A6YYD5 115 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 DCDC2BA2VCK2 349 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FAM181BA6NEQ2 426 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A20O43772 301 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 AKR7A3O95154 331 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MGST1P10620 155 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 SDC1P18827 310 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SRIP30626 198 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MGAT3Q09327 533 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 IL24Q13007 206 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CEACAM7Q14002 265 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NNATQ16517 81 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TCTN1Q2MV58 587 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SPNS2Q8IVW8 549 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 LRTM2Q8N967 370 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ZNF714Q96N38 554 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ZNF552Q9H707 407 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 PTGDR2Q9Y5Y4 395 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FAM149AA5PLN7 773 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PRSS47A8MTI9 375 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 BANF1O75531 89 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 LYZL6O75951 148 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MMP7P09237 267 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 RPS26P62854 115 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 JOSD1Q15040 202 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 MARCH8Q5T0T0 291 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SFTA2Q6UW10 78 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 Q6ZT83 130 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FBXO27Q8NI29 283 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PACRGQ96M98 296 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A19Q9HC21 320 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NRN1Q9NPD7 142 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NOX4Q9NPH5 578 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PRDM7Q9NQW5 492 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RNF7Q9UBF6 113 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TCRBV3S1A0A5B6 114 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 OR4C45A6NMZ5 311 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TFAP2AP05549 437 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms