RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TMEM104Q8NE00 496 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 LFNGQ8NES3 379 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SEMA6DQ8NFY4 1073 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 OR10A7Q8NGE5 316 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SLC25A43Q8WUT9 341 aaPredicted RBP4.41□□□□□ -1.7
SSR1-202ENST00000397511 C11orf40Q8WZ69 217 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 RAB39BQ96DA2 213 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SLAMF6Q96DU3 332 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 FAM210BQ96KR6 192 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SNX22Q96L94 193 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 DOCK7Q96N67 2140 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 PARP12Q9H0J9 701 aaKnown RBP4.41□□□□□ -1.7
SSR1-202ENST00000397511 SMDT1Q9H4I9 107 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 METTL7AQ9H8H3 244 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 G6PC2Q9NQR9 355 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 MEMO1Q9Y316 297 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 NCOA6Q14686 2063 aaPredicted RBP4.41□□□□□ -1.7
SSR1-202ENST00000397511 A0A1W2PR77 199 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 TRDCB7Z8K6 153 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 F5H5K5 113 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 H3BQ15 152 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 K7EPK0 472 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SIAH2O43255 324 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 EFSO43281 561 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 CDC14BO60729 498 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 DXOO77932 396 aaKnown RBP4.41□□□□□ -1.7
SSR1-202ENST00000397511 MPIG6BO95866 241 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 PRH1P02810 166 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 TK1P04183 234 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 GUSBP08236 651 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 GLI4P10075 376 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 FOSL2P15408 326 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 TBPP20226 339 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 NPY4RP50391 375 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 ERVFRD-1P60508 538 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 DCAF7P61962 342 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 MYBPHQ13203 477 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 UNC119Q13432 240 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 TRA2AQ13595 282 aaKnown RBP eCLIP4.41□□□□□ -1.78e-9■■■■■ 27
SSR1-202ENST00000397511 HERPUD1Q15011 391 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SLC9A3R2Q15599 337 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 C4orf17Q53FE4 359 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 RIPPLY2Q5TAB7 128 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 NCR3LG1Q68D85 454 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 ABLIM2Q6H8Q1 611 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 ZNF774Q6NX45 483 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 KLHL24Q6TFL4 600 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 ADGRE4PQ86SQ3 457 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 FAM71E2Q8N5Q1 922 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 APCDD1LQ8NCL9 501 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 MARCH1Q8TCQ1 289 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 ABHD5Q8WTS1 349 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 LIPHQ8WWY8 451 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SGCZQ96LD1 299 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 GNRHR2Q96P88 292 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 SCRT1Q9BWW7 348 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 RAB18Q9NP72 206 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 ZNF319Q9P2F9 582 aa4.41□□□□□ -1.7
SSR1-202ENST00000397511 STRAPQ9Y3F4 350 aaKnown RBP4.41□□□□□ -1.7
SSR1-202ENST00000397511 LILRA5A6NI73 299 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 VSTM2BA6NLU5 285 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 H3BMH7 237 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 SOCS1O15524 211 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 ZNF217O75362 1048 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 DIRAS3O95661 229 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 AMBPP02760 352 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 TTRP02766 147 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 IFNA6P05013 189 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 CST2P09228 141 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 DANCRP0C864 163 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 OR3A4PP47883 348 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 CLRN1P58418 232 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 RBX1P62877 108 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 SLC35A1P78382 337 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 DLK1P80370 383 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 PAX5Q02548 391 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 RAB35Q15286 201 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 H1FNTQ75WM6 255 aaPredicted RBP4.4□□□□□ -1.7
SSR1-202ENST00000397511 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 BHLHE23Q8NDY6 225 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 HLA-CQ95604 372 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 ZNF501Q96CX3 271 aaPredicted RBP4.4□□□□□ -1.7
SSR1-202ENST00000397511 FAM122AQ96E09 287 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 LIN37Q96GY3 246 aaPredicted RBP4.4□□□□□ -1.7
SSR1-202ENST00000397511 RCC1LQ96I51 464 aaKnown RBP4.4□□□□□ -1.7
SSR1-202ENST00000397511 URM1Q9BTM9 101 aaKnown RBP4.4□□□□□ -1.7
SSR1-202ENST00000397511 ST6GALNAC5Q9BVH7 336 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 PBOV1Q9GZY1 135 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 METTL8Q9H825 291 aaKnown RBP4.4□□□□□ -1.7
SSR1-202ENST00000397511 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 GLRX2Q9NS18 164 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 GPR27Q9NS67 375 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 PLA2G2EQ9NZK7 142 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 DKKL1Q9UK85 242 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 R4GMQ9 66 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 KNTC1P50748 2209 aa4.4□□□□□ -1.7
SSR1-202ENST00000397511 A0A1B0GW64 132 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 A8MXE2 369 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 E9PLN8 166 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GEMIN2O14893 280 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms