RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SAXO1Q8IYX7 474 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 ZSCAN4Q8NAM6 433 aaPredicted RBP16.47■□□□□ 0.23
SNCA-203ENST00000394986 CPNE2Q96FN4 548 aaPredicted RBP16.47■□□□□ 0.23
SNCA-203ENST00000394986 MRI1Q9BV20 369 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 HMG20AQ9NP66 347 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 GSTK1Q9Y2Q3 226 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 AUP1Q9Y679 476 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 CDRT1O95170 752 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 HAND1O96004 215 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 PSMB9P28065 219 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 UBE2UQ5VVX9 321 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 JAGN1Q8N5M9 183 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 ASCC1Q8N9N2 400 aaKnown RBP16.46■□□□□ 0.23
SNCA-203ENST00000394986 THRSPQ92748 146 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 DCTN5Q9BTE1 182 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 RPUSD1Q9UJJ7 312 aaKnown RBP16.46■□□□□ 0.23
SNCA-203ENST00000394986 C2CD3Q4AC94 2353 aa16.46■□□□□ 0.23
SNCA-203ENST00000394986 RGS9O75916 674 aaPredicted RBP16.45■□□□□ 0.22
SNCA-203ENST00000394986 GABRA5P31644 462 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 PTGFRP43088 359 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 CAV3P56539 151 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 RIPPLY3P57055 190 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 FGF12P61328 243 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 FABP5Q01469 135 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 ZNF561Q8N587 486 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 PXT1Q8NFP0 134 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 POM121Q96HA1 1249 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 TMEM82A0PJX8 343 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 ZNF737O75373 536 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 ECDO95905 644 aaPredicted RBP16.45■□□□□ 0.22
SNCA-203ENST00000394986 UCHL1P09936 223 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 FAM157CP0CG43 387 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 ZNF146Q15072 292 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 PDCD1Q15116 288 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 RSU1Q15404 277 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 HSD17B12Q53GQ0 312 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 FIP1L1Q6UN15 594 aaKnown RBP16.45■□□□□ 0.22
SNCA-203ENST00000394986 PNLDC1Q8NA58 520 aaKnown RBP16.45■□□□□ 0.22
SNCA-203ENST00000394986 MUL1Q969V5 352 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 TCF7L1Q9HCS4 588 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 ING4Q9UNL4 249 aa16.45■□□□□ 0.22
SNCA-203ENST00000394986 WNK2Q9Y3S1 2297 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 SIRPB1O00241 398 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 GPR37O15354 613 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 TK1P04183 234 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 CHRM2P08172 466 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 PPIAL4GP0DN37 164 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 ARF6P62330 175 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 TRAM1Q15629 374 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 SPIN3Q5JUX0 258 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 ASCL4Q6XD76 172 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 LRRTM1Q86UE6 522 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 LYPD6Q86Y78 171 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 LY6G5BQ8NDX9 201 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 OR4M1Q8NGD0 313 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 NR1H4Q96RI1 486 aaPredicted RBP16.44■□□□□ 0.22
SNCA-203ENST00000394986 CHST6Q9GZX3 395 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 CNTD2Q9H8S5 307 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 C19orf12Q9NSK7 152 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 NDUFB11Q9NX14 153 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 ONECUT1Q9UBC0 465 aa16.44■□□□□ 0.22
SNCA-203ENST00000394986 IGHV3OR16-10A0A075B7F0 116 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 A0A1W2PP11 408 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 HTR3BO95264 441 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 FSHBP01225 129 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 PSMA1P25786 263 aaKnown RBP16.43■□□□□ 0.22
SNCA-203ENST00000394986 JMJD1CQ15652 2540 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 NEDD8Q15843 81 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 KLF17Q5JT82 389 aaPredicted RBP16.43■□□□□ 0.22
SNCA-203ENST00000394986 C17orf107Q6ZR85 190 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 PRIMA1Q86XR5 153 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 OR4D6Q8NGJ1 314 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 FCGR1BQ92637 280 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 PCGF1Q9BSM1 259 aa16.43■□□□□ 0.22
SNCA-203ENST00000394986 EXOSC4Q9NPD3 245 aaKnown RBP16.43■□□□□ 0.22
SNCA-203ENST00000394986 MRPS28Q9Y2Q9 187 aaKnown RBP16.43■□□□□ 0.22
SNCA-203ENST00000394986 K7N7A8 449 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 PSPNO60542 156 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 OR2H2O95918 312 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 SRMP19623 302 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 SERPINA2P20848 420 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 GABRR1P24046 479 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 MTNR1BP49286 362 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 SCN1BQ07699 218 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 PIGYQ3MUY2 71 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 ELP2Q6IA86 826 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 FAM185AQ8N0U4 392 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 NKAIN3Q8N8D7 197 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 C8orf46Q8TAG6 207 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 NANPQ8TBE9 248 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 METTL9Q9H1A3 318 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 RHOFQ9HBH0 211 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 ZNF581Q9P0T4 197 aa16.42■□□□□ 0.22
SNCA-203ENST00000394986 CUBNO60494 3623 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 A0A1W2PQ09 198 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 MEX3AA1L020 520 aaKnown RBP16.41■□□□□ 0.22
SNCA-203ENST00000394986 CCRL2O00421 344 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 TNFAIP8O95379 198 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 IGHV4-38-2P0DP08 117 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 MMP9P14780 707 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms