RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TRBV6-7A0A0A0MS04 114 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 IGKV1-9A0A0C4DH69 117 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 IGHMP01871 453 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 LCATP04180 440 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 GSK3AP49840 483 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 HERV-K104P61576 105 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 KIAA2026Q5HYC2 2103 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 FAM209BQ5JX69 171 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 SUMF2Q8NBJ7 301 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 BSCL2Q96G97 398 aaPredicted RBP9.47□□□□□ -0.89
BRF1-204ENST00000392557 SH3BGRL3Q9H299 93 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 ZNF442Q9H7R0 627 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 MOB1AQ9H8S9 216 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 B3GAT1Q9P2W7 334 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 COL5A1P20908 1838 aaPredicted RBP9.47□□□□□ -0.89
BRF1-204ENST00000392557 A0A1W2PPE3 182 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 PQLC2LA1A4F0 135 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 IGHV3-9P01782 118 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 NHLH2Q02577 135 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 EXT1Q16394 746 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 C9orf135Q5VTT2 229 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 C15orf54Q8N8G6 183 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 ZFP62Q8NB50 900 aaPredicted RBP9.47□□□□□ -0.89
BRF1-204ENST00000392557 UCN2Q96RP3 112 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 OCSTAMPQ9BR26 566 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 PBDC1Q9BVG4 233 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 MAGT1Q9H0U3 335 aa9.47□□□□□ -0.89
BRF1-204ENST00000392557 MCTS1Q9ULC4 181 aaKnown RBP9.47□□□□□ -0.89
BRF1-204ENST00000392557 MT-ND4LP03901 98 aa9.46□□□□□ -0.89
BRF1-204ENST00000392557 ECH1Q13011 328 aa9.46□□□□□ -0.89
BRF1-204ENST00000392557 PPA1Q15181 289 aa9.46□□□□□ -0.89
BRF1-204ENST00000392557 HAGHQ16775 308 aa9.46□□□□□ -0.89
BRF1-204ENST00000392557 AKR7LQ8NHP1 331 aa9.46□□□□□ -0.89
BRF1-204ENST00000392557 PARP11Q9NR21 331 aa9.46□□□□□ -0.89
BRF1-204ENST00000392557 TRA2AQ13595 282 aaKnown RBP eCLIP9.46□□□□□ -0.9
BRF1-204ENST00000392557 UBE2V2Q15819 145 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 ZNF674Q2M3X9 581 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 SLC22A25Q6T423 547 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 OR6S1Q8NH40 331 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 OR14L1PQ8NHC6 308 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 IMMP1LQ96LU5 166 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 C19orf12Q9NSK7 152 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 OSGIN2Q9Y236 505 aa9.46□□□□□ -0.9
BRF1-204ENST00000392557 A0A0G2JMM0 328 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 A0A1W2PPB8 328 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 A0A1W2PRS3 328 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 KIR3DP1A8MWS1 328 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 WRBO00258 174 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 HSPB6O14558 160 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 TNFSF11O14788 317 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 OR2C1O95371 312 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 S100A8P05109 93 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 CCNOP22674 350 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 MPZP25189 248 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 NDUFA6P56556 154 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 VAMP2P63027 116 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 TIPARPQ7Z3E1 657 aaKnown RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 RNASE11Q8TAA1 199 aaKnown RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 CACFD1Q9UGQ2 172 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 KLF2Q9Y5W3 355 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 EXPH5Q8NEV8 1989 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 IGHV3-64DA0A0J9YX35 117 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 SERPINE3A8MV23 424 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 E5RGE8 158 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 M0R135 149 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 PATE4P0C8F1 98 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 RAB5AP20339 215 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 SULT1A1P50225 295 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 RAB2AP61019 212 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 ZP4Q12836 540 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 KIAA0141Q14154 515 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 CT55Q8WUE5 264 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 BORCS8Q96FH0 119 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 ZNF799Q96GE5 643 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 STRADBQ9C0K7 418 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 TCFL5Q9UL49 500 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 NSG2Q9Y328 171 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 UBE2J1Q9Y385 318 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 NCOA6Q14686 2063 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 PCNX2A6NKB5 2137 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 E9PLN8 166 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 DEDDO75618 318 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 OR7C1O76099 320 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 ONECUT2O95948 504 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 MBPP02686 304 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 P04436 131 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 FCGR3AP08637 254 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 PGA4P0DJD7 388 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 PGA3P0DJD8 388 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 S100A2P29034 98 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 NOVA1P51513 510 aaKnown RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 S100A12P80511 92 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 TSC22D1Q15714 1073 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 C6orf15Q6UXA7 325 aaPredicted RBP9.45□□□□□ -0.9
BRF1-204ENST00000392557 LYPD6Q86Y78 171 aa9.45□□□□□ -0.9
BRF1-204ENST00000392557 GJC3Q8NFK1 279 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms