RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ACTA2P62736 377 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ACTG2P63267 376 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ACTC1P68032 377 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ACTA1P68133 377 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ZNF91Q05481 1191 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 CNN3Q15417 329 aaKnown RBP11.41□□□□□ -0.58
SHOX-202ENST00000381575 Q6ZS46 218 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OR4S1Q8NGB4 309 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OR2G2Q8NGZ5 317 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 CFHR4Q92496 578 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 SNX22Q96L94 193 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OSBPL10Q9BXB5 764 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 SERTAD4Q9NUC0 356 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 A6NDX4 124 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 SIRPB1O00241 398 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 SERPINA3P01011 423 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 CD28P10747 220 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ZNF20P17024 532 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 AZGP1P25311 298 aaKnown RBP11.41□□□□□ -0.58
SHOX-202ENST00000381575 RBP2P50120 134 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OR12D2P58182 307 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 ZIK1Q3SY52 487 aaPredicted RBP11.41□□□□□ -0.58
SHOX-202ENST00000381575 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OR11H6Q8NGC7 330 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OR51A4Q8NGJ6 313 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 OR5D18Q8NGL1 313 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 NDNFQ8TB73 568 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 RPS4Y2Q8TD47 263 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 FOXRED1Q96CU9 486 aaPredicted RBP11.41□□□□□ -0.58
SHOX-202ENST00000381575 RNFT2Q96EX2 444 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 CDCA4Q9BXL8 241 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 IMPAD1Q9NX62 359 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 FRRS1LQ9P0K9 344 aa11.41□□□□□ -0.58
SHOX-202ENST00000381575 TBL2Q9Y4P3 447 aaKnown RBP11.41□□□□□ -0.58
SHOX-202ENST00000381575 IGHV2-26A0A0B4J1V2 119 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 TRBV2A0A0J9YWF9 115 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 hADV38S2A0JD32 116 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 F2RL2O00254 374 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 CIB2O75838 187 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 RBP4P02753 201 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 ATF1P18846 271 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 PEX2P28328 305 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 OR3A1P47881 315 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 RASSF2P50749 326 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 ATP1B3P54709 279 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 MTCP1P56278 107 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 SLC34A1Q06495 639 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 PRAMEF5Q5TYX0 476 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 TRAPPC6BQ86SZ2 158 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 PP6455Q8WZ26 134 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 RFKQ969G6 155 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 MALSU1Q96EH3 234 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 ING3Q9NXR8 418 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 GSTK1Q9Y2Q3 226 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 SESN1Q9Y6P5 492 aa11.4□□□□□ -0.59
SHOX-202ENST00000381575 IGKV1-12A0A0C4DH73 117 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 DAPL1A0PJW8 107 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 J3QLW9 94 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 EI24O14681 340 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 FBXO24O75426 580 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 IGKV1D-12P01611 117 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 OPN1MWP04001 364 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 OPN1MW2P0DN77 364 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 OPN1MW3P0DN78 364 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 ZNF19P17023 458 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 CD24P25063 80 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 BLCAPP62952 87 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 MEF2CQ06413 473 aaPredicted RBP11.39□□□□□ -0.59
SHOX-202ENST00000381575 BEAN1Q3B7T3 259 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 ARSJQ5FYB0 599 aaPredicted RBP11.39□□□□□ -0.59
SHOX-202ENST00000381575 TMEM244Q5VVB8 128 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 C11orf88Q6PI97 169 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 OR13C9Q8NGT0 318 aa11.39□□□□□ -0.59
SHOX-202ENST00000381575 A0A0G2JK05 382 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 J3QRE1 110 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 SLC16A6O15403 523 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 OR2H2O95918 312 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 CYB5AP00167 134 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 ALPLP05186 524 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 HTR1AP08908 422 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 OCM2P0CE71 109 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
SHOX-202ENST00000381575 GDNFP39905 211 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 SCN1BQ07699 218 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 PDZK1IP1Q13113 114 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 TMED1Q13445 227 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 LHFPL2Q6ZUX7 228 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 Q8IYB0 196 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 CCDC54Q8NEL0 328 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 OR13C3Q8NGS6 347 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 C4orf36Q96KX1 117 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 OPALINQ96PE5 141 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
SHOX-202ENST00000381575 CLEC7AQ9BXN2 247 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms