RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SLC25A10Q9UBX3 287 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 OR14J1Q9UGF5 321 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 MTORP42345 2549 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 TRDV1A0A1B0GX56 115 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 CRLF1O75462 422 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 SFTPBP07988 381 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 FGF12P61328 243 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 IKZF1Q13422 519 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 GPR176Q14439 515 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 RSU1Q15404 277 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 FAM27D1Q5T7N8 215 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 GLT8D1Q68CQ7 371 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 LRRTM1Q86UE6 522 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 LYPD6Q86Y78 171 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 JAGN1Q8N5M9 183 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 NUDT16L1Q9BRJ7 211 aaKnown RBP10.98□□□□□ -0.65
CKAP2-202ENST00000378034 FAM192AQ9GZU8 254 aa10.98□□□□□ -0.65
CKAP2-202ENST00000378034 A0A1B0GW55 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 MAGEA13PA6NCF6 341 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 SH2D1BO14796 132 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 FCN3O75636 299 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L2P0CJ85 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L3P0CJ86 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L4P0CJ87 422 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L5P0CJ88 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L6P0CJ89 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L7P0CJ90 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 CD37P11049 281 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 OR3A4PP47883 348 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 PAX8Q06710 450 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4L9Q6RFH8 374 aaPredicted RBP10.97□□□□□ -0.65
CKAP2-202ENST00000378034 BTN2A1Q7KYR7 527 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 C1QL2Q7Z5L3 287 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 ZNRF1Q8ND25 227 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 C8orf46Q8TAG6 207 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 MRI1Q9BV20 369 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 BEX2Q9BXY8 128 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 TMPRSS13Q9BYE2 586 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 PPIL3Q9H2H8 161 aaKnown RBP10.97□□□□□ -0.65
CKAP2-202ENST00000378034 C7orf69Q9H7B7 122 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DUX4Q9UBX2 424 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 RPUSD1Q9UJJ7 312 aaKnown RBP10.97□□□□□ -0.65
CKAP2-202ENST00000378034 ING4Q9UNL4 249 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 TRIM64CA6NLI5 447 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 C22orf46C9J442 243 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 K7N7A8 449 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 HAND1O96004 215 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 PPIAL4GP0DN37 164 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 RANBP1P43487 201 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 NEDD8Q15843 81 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 CHRFAM7AQ494W8 412 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 LY6G5BQ8NDX9 201 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 TMEM185AQ8NFB2 350 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 OR51T1Q8NGJ9 327 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 OR5D13Q8NGL4 314 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 MUL1Q969V5 352 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 SNX22Q96L94 193 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 DCTN5Q9BTE1 182 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 CNTD2Q9H8S5 307 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 ELL3Q9HB65 397 aaPredicted RBP10.97□□□□□ -0.65
CKAP2-202ENST00000378034 GHRLQ9UBU3 117 aa10.97□□□□□ -0.65
CKAP2-202ENST00000378034 MRPS28Q9Y2Q9 187 aaKnown RBP10.97□□□□□ -0.65
CKAP2-202ENST00000378034 TRBV23-1A0A0A0MS06 115 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 CSTBP04080 98 aaKnown RBP10.96□□□□□ -0.65
CKAP2-202ENST00000378034 TFF1P04155 84 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 TK1P04183 234 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 SELLP14151 372 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 NDUFB7P17568 137 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 ADRA2CP18825 462 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 CEBPDP49716 269 aaPredicted RBP10.96□□□□□ -0.65
CKAP2-202ENST00000378034 PSMD7P51665 324 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 CAPZA1P52907 286 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 COL10A1Q03692 680 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 IL13RA2Q14627 380 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 NHLRC3Q5JS37 347 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 CHST4Q8NCG5 386 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 PPP1R35Q8TAP8 253 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 TBC1D15Q8TC07 691 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 EXOSC4Q9NPD3 245 aaKnown RBP10.96□□□□□ -0.65
CKAP2-202ENST00000378034 STUB1Q9UNE7 303 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 GSTK1Q9Y2Q3 226 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 AUP1Q9Y679 476 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 ARHGAP32A7KAX9 2087 aa10.96□□□□□ -0.65
CKAP2-202ENST00000378034 TRAV1-2A0A0B4J238 106 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 ZNF737O75373 536 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 CDRT1O95170 752 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 HTR3BO95264 441 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 UBBP0CG47 229 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 LMO1P25800 156 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 CALRP27797 417 aaKnown RBP10.96□□□□□ -0.66
CKAP2-202ENST00000378034 FGF9P31371 208 aaPredicted RBP10.96□□□□□ -0.66
CKAP2-202ENST00000378034 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 MRPS24Q96EL2 167 aaKnown RBP10.96□□□□□ -0.66
CKAP2-202ENST00000378034 IL36RNQ9UBH0 155 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 METRNQ9UJH8 293 aa10.96□□□□□ -0.66
CKAP2-202ENST00000378034 JUNBP17275 347 aaPredicted RBP10.95□□□□□ -0.66
CKAP2-202ENST00000378034 AWAT2Q6E213 333 aa10.95□□□□□ -0.66
CKAP2-202ENST00000378034 GLIPR1L1Q6UWM5 242 aa10.95□□□□□ -0.66
CKAP2-202ENST00000378034 LINC00596Q86U02 117 aa10.95□□□□□ -0.66
CKAP2-202ENST00000378034 OR8H2Q8N162 312 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms