RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 MAGEB3O15480 346 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SULT1B1O43704 296 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 RPSAP08865 295 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SAA4P35542 130 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 CAPGP40121 348 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 UBE2E1P51965 193 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 ERVFRD-1P60508 538 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SCN1BQ07699 218 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 PDZK1IP1Q13113 114 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 GRK1Q15835 563 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 C1orf122Q6ZSJ8 110 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SATL1Q86VE3 508 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SERPINA12Q8IW75 414 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 C8orf59Q8N0T1 100 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 OR5D14Q8NGL3 314 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 HAVCR2Q8TDQ0 301 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 TMEM80Q96HE8 168 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SNX22Q96L94 193 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 GPER1Q99527 375 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 ZNF649Q9BS31 505 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 FAM192AQ9GZU8 254 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 DPAGT1Q9H3H5 408 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 EXOSC4Q9NPD3 245 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 EXOSC1Q9Y3B2 195 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 PCDHGB5Q9Y5G0 923 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 POMT1Q9Y6A1 747 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 TMEM82A0PJX8 343 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 TMEM225BP0DP42 221 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 ZNF44P15621 663 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 RAB3AP20336 220 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 MDKP21741 143 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 IER3P46695 156 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 BMXP51813 675 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 RAG2P55895 527 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 LGALS4P56470 323 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 IL18R1Q13478 541 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 CDK5R1Q15078 307 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 OGFRL1Q5TC84 451 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 XAF1Q6GPH4 301 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 RPL22L1Q6P5R6 122 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 TRAPPC6BQ86SZ2 158 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 LDLRAD3Q86YD5 345 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 OR8H2Q8N162 312 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 TPRX1Q8N7U7 411 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 PPP1R35Q8TAP8 253 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 GPR148Q8TDV2 347 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 HEXA-AS1Q9H8Q6 139 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 ING3Q9NXR8 418 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 TAS2R4Q9NYW5 299 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 ZNRD1Q9P1U0 126 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 CLEC2DQ9UHP7 191 aa9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 DIMT1Q9UNQ2 313 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-203ENST00000377808 IGKV1-12A0A0C4DH73 117 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 PNMA8CA0A1B0GUJ8 204 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 ERICH4A6NGS2 130 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 GPR137BO60478 399 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 ZNF737O75373 536 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 IGKV1D-12P01611 117 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 MT-ND2P03891 347 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 CD2P06729 351 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 GNAO1P09471 354 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 PPP3R1P63098 170 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 ADARB1P78563 741 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 ACSM1Q08AH1 577 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 KISS1Q15726 138 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 CCDC58Q4VC31 144 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 SPIN3Q5JUX0 258 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 DHRS7BQ6IAN0 325 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 AHSA2Q719I0 299 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 STX19Q8N4C7 294 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 ZFP41Q8N8Y5 198 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 BPIFB6Q8NFQ5 453 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 OR4F5Q8NH21 305 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 C17orf50Q8WW18 174 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 DYRK2Q92630 601 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 GGHQ92820 318 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 CPNE2Q96FN4 548 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 NR1H4Q96RI1 486 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 JAM3Q9BX67 310 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 BEX1Q9HBH7 125 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 HMG20AQ9NP66 347 aa9.45□□□□□ -0.9
SMARCE1-203ENST00000377808 hADV38S2A0JD32 116 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 EFCAB10A6NFE3 127 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 SH2D1BO14796 132 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 MYL12BO14950 172 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 CASQ2O14958 399 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 XPNPEP2O43895 674 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 PSPNO60542 156 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 KDM4BO94953 1096 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 OR2H2O95918 312 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 ARG1P05089 322 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 ZNF728P0DKX0 622 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 PAX6P26367 422 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 ST3GAL4Q11206 333 aa9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 DYNC1I2Q13409 638 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-203ENST00000377808 ZNF146Q15072 292 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms