RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 Q96M66 194 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 ZNF488Q96MN9 340 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 BCO1Q9HAY6 547 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 PROK2Q9HC23 129 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 TMEM38BQ9NVV0 291 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 GHRLQ9UBU3 117 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 FBXO9Q9UK97 447 aaPredicted RBP11.23□□□□□ -0.61
USP11-204ENST00000377107 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
USP11-204ENST00000377107 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ZNF587BE7ETH6 402 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 H3BP45 60 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 WRBO00258 174 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 FCGR3AP08637 254 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 CD37P11049 281 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 NAT2P11245 290 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 MRPS34P82930 218 aaKnown RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 PEA15Q15121 130 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 TMEM182Q6ZP80 229 aaPredicted RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 MRPL21Q7Z2W9 205 aaKnown RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 EIF4E3Q8N5X7 224 aaKnown RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 SLC2A9Q9NRM0 540 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 IL36RNQ9UBH0 155 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 CST7O76096 145 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 AADACP22760 399 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 MLF1P58340 268 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ARL6IP1Q15041 203 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 TSC22D1Q15714 1073 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 MIDNQ504T8 468 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 DCAF12Q5T6F0 453 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 MCEMP1Q8IX19 187 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 C14orf79Q96F83 325 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 RGCCQ9H4X1 137 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ESRP2Q9H6T0 727 aaKnown RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 MMP26Q9NRE1 261 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 A0A1W2PR80 420 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 RAB19A4D1S5 217 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 FGF5P12034 268 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 CCL1P22362 96 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ARF1P84077 181 aaKnown RBP11.22□□□□□ -0.61
USP11-204ENST00000377107 GNMTQ14749 295 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ZNF695Q8IW36 515 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 OR2V1Q8NHB1 315 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 TMEM54Q969K7 222 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 HIST1H2AAQ96QV6 131 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 V9GYS6 101 aa11.22□□□□□ -0.61
USP11-204ENST00000377107 ROS1P08922 2347 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 PTPRZ1P23471 2315 aaPredicted RBP11.21□□□□□ -0.61
USP11-204ENST00000377107 KCNJ3P48549 501 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 SH3BGRL3Q9H299 93 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 DEPPQ9NTK1 212 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 PURGQ9UJV8 347 aaKnown RBP11.21□□□□□ -0.61
USP11-204ENST00000377107 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.61
USP11-204ENST00000377107 BORCS7-ASMTA0A0B4J1R7 106 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 PINLYPA6NC86 204 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 FAM24AA6NFZ4 105 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 FKBP2P26885 142 aaKnown RBP11.21□□□□□ -0.62
USP11-204ENST00000377107 DUSP3P51452 185 aaPredicted RBP11.21□□□□□ -0.62
USP11-204ENST00000377107 VAMP2P63027 116 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 KCNMB1Q16558 191 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 OR51H1Q8NH63 302 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 SYT3Q9BQG1 590 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 OR2H1Q9GZK4 316 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 TCFL5Q9UL49 500 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 CPAMD8Q8IZJ3 1885 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 S100A6P06703 90 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 C10orf128Q5T292 105 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 SPSB1Q96BD6 273 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 NRIP2Q9BQI9 281 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 NAA60Q9H7X0 242 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 SPACA1Q9HBV2 294 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 LOXL2Q9Y4K0 774 aa11.21□□□□□ -0.62
USP11-204ENST00000377107 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
USP11-204ENST00000377107 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 LOC102725191A0A1B0GVB3 256 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 SSSCA1O60232 199 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 CTSDP07339 412 aaPredicted RBP11.2□□□□□ -0.62
USP11-204ENST00000377107 RPS2P15880 293 aaKnown RBP11.2□□□□□ -0.62
USP11-204ENST00000377107 NAT1P18440 290 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
USP11-204ENST00000377107 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
USP11-204ENST00000377107 ABHD17BQ5VST6 288 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 TUSC5Q8IXB3 177 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 SGCZQ96LD1 299 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 WDR54Q9H977 334 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 PUS1Q9Y606 427 aaKnown RBP eCLIP11.2□□□□□ -0.62
USP11-204ENST00000377107 SYNGR3O43761 229 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 CNOT4O95628 575 aaKnown RBP11.2□□□□□ -0.62
USP11-204ENST00000377107 CST4P01036 141 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms