RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
HSPG2-202ENST00000374676 GABRA2P47869 451 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 FGF12P61328 243 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 SEC61A1P61619 476 aaKnown RBP9.45□□□□□ -0.9
HSPG2-202ENST00000374676 DGUOKQ16854 277 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 NHLRC3Q5JS37 347 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 FAM166AQ6J272 317 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 GLIPR1L1Q6UWM5 242 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 TPRA1Q86W33 373 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 ZNF561Q8N587 486 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 CD177Q8N6Q3 437 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 OR6M1Q8NGM8 313 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 C1orf147Q96MC9 270 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-202ENST00000374676 NKX3-1Q99801 234 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-202ENST00000374676 SSBP3Q9BWW4 388 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-202ENST00000374676 FAM192AQ9GZU8 254 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 ELL3Q9HB65 397 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-202ENST00000374676 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 GLS2Q9UI32 602 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 V9GY05 133 aa9.45□□□□□ -0.9
HSPG2-202ENST00000374676 MXRA5Q9NR99 2828 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 TRAV20A0A0B4J274 112 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 LOC100506127A0A0U1RQW1 187 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 KIAA1324LA8MWY0 1029 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-202ENST00000374676 SLC17A2O00624 439 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 DVL1O14640 695 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 SH2D1BO14796 132 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 AIREO43918 545 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 FCN3O75636 299 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 HTR3BO95264 441 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 LY6G6DO95868 133 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 ECDO95905 644 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-202ENST00000374676 CSTBP04080 98 aaKnown RBP9.44□□□□□ -0.9
HSPG2-202ENST00000374676 MSMBP08118 114 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 RAB3BP20337 219 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 LMO1P25800 156 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 CFPP27918 469 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 HTR2CP28335 458 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 RPL5P46777 297 aaKnown RBP9.44□□□□□ -0.9
HSPG2-202ENST00000374676 CAPZA1P52907 286 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 DVL1P1P54792 670 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-202ENST00000374676 CAV3P56539 151 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 GNB2P62879 340 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 IL13RA2Q14627 380 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 LRRC10Q5BKY1 277 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 CD276Q5ZPR3 534 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 AWAT2Q6E213 333 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 OSR2Q8N2R0 312 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 FAM216BQ8N7L0 139 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 OR10K1Q8NGX5 313 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 SLC25A28Q96A46 364 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 MRPS24Q96EL2 167 aaKnown RBP9.44□□□□□ -0.9
HSPG2-202ENST00000374676 POM121Q96HA1 1249 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 SMR3AQ99954 134 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 FUNDC2Q9BWH2 189 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 FAM234AQ9H0X4 552 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 IL36RNQ9UBH0 155 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 KIAA2026Q5HYC2 2103 aa9.44□□□□□ -0.9
HSPG2-202ENST00000374676 A0A1B0GW55 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 K7N7A8 449 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 PHF1O43189 567 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-202ENST00000374676 ZNF737O75373 536 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 BPNT1O95861 308 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 HAND1O96004 215 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 TFF1P04155 84 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L2P0CJ85 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L3P0CJ86 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L4P0CJ87 422 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L5P0CJ88 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L6P0CJ89 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L7P0CJ90 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 CALCBP10092 127 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 GTF2F2P13984 249 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 ZNF16P17020 682 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUSP1P28562 367 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 LCN2P80188 198 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 PAX2Q02962 417 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 SLC22A6Q4U2R8 563 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 Q6P435 159 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4L9Q6RFH8 374 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-202ENST00000374676 CLEC9AQ6UXN8 241 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 GPR141Q7Z602 305 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 LINC00596Q86U02 117 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 GLCCI1Q86VQ1 547 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 CHST4Q8NCG5 386 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DACT3Q96B18 629 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-202ENST00000374676 TMEM186Q96B77 213 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 SNX22Q96L94 193 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DMRTB1Q96MA1 342 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 RNF167Q9H6Y7 350 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 PLGRKTQ9HBL7 147 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 DUX4Q9UBX2 424 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 SLC25A10Q9UBX3 287 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-202ENST00000374676 SCOCQ9UIL1 159 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 ST3GAL6Q9Y274 331 aa9.43□□□□□ -0.9
HSPG2-202ENST00000374676 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms