RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 FAM157CP0CG43 387 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 CALCBP10092 127 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 PRKACAP17612 351 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 PTGFRP43088 359 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 CAPZA1P52907 286 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 TRAM1Q15629 374 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 KCTD21Q4G0X4 260 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 CEACAM19Q7Z692 300 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 PHC2Q8IXK0 858 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 PXT1Q8NFP0 134 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 H1FXQ92522 213 aaKnown RBP13.23□□□□□ -0.29
HDHD3-202ENST00000374180 TSC22D3Q99576 134 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 ELL3Q9HB65 397 aaPredicted RBP13.23□□□□□ -0.29
HDHD3-202ENST00000374180 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 OPN4Q9UHM6 478 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
HDHD3-202ENST00000374180 SFTPBP07988 381 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 CHRM2P08172 466 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 PSMA1P25786 263 aaKnown RBP13.23□□□□□ -0.29
HDHD3-202ENST00000374180 DUSP1P28562 367 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 CAV3P56539 151 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 ARMCX4Q5H9R4 360 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 C1QL2Q7Z5L3 287 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 NKX3-1Q99801 234 aaPredicted RBP13.23□□□□□ -0.29
HDHD3-202ENST00000374180 TCF7L1Q9HCS4 588 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 IL36RNQ9UBH0 155 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 GLS2Q9UI32 602 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
HDHD3-202ENST00000374180 SC5DO75845 299 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 ADRA2CP18825 462 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 OR3A4PP47883 348 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 SNU13P55769 128 aaKnown RBP13.22□□□□□ -0.29
HDHD3-202ENST00000374180 RPS25P62851 125 aaKnown RBP13.22□□□□□ -0.29
HDHD3-202ENST00000374180 COL10A1Q03692 680 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 ZNF146Q15072 292 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 RSU1Q15404 277 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 FAM27D1Q5T7N8 215 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 ASCC1Q8N9N2 400 aaKnown RBP13.22□□□□□ -0.29
HDHD3-202ENST00000374180 NANPQ8TBE9 248 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 S100A13Q99584 98 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 DCTN5Q9BTE1 182 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 CNTD2Q9H8S5 307 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 SEBOXQ9HB31 216 aaPredicted RBP13.22□□□□□ -0.29
HDHD3-202ENST00000374180 ING4Q9UNL4 249 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
HDHD3-202ENST00000374180 MEGF11A6BM72 1044 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 SH2D1BO14796 132 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 CDRT1O95170 752 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 HAND1O96004 215 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 TK1P04183 234 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 PPIAL4GP0DN37 164 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 SRMP19623 302 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 GABRA5P31644 462 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 BMXP51813 675 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 HSD17B12Q53GQ0 312 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 ASCL4Q6XD76 172 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 CDH26Q8IXH8 852 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 LY6G5BQ8NDX9 201 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 FCGR1BQ92637 280 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 FAM234AQ9H0X4 552 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.3
HDHD3-202ENST00000374180 SF3B6Q9Y3B4 125 aaKnown RBP13.21□□□□□ -0.3
HDHD3-202ENST00000374180 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 K7N7A8 449 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 RGS9O75916 674 aaPredicted RBP13.2□□□□□ -0.3
HDHD3-202ENST00000374180 UCHL1P09936 223 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 PSMB9P28065 219 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 MTNR1BP49286 362 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 GP2P55259 537 aaKnown RBP13.2□□□□□ -0.3
HDHD3-202ENST00000374180 FGF12P61328 243 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 ARF6P62330 175 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 SSX1Q16384 188 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 ELP2Q6IA86 826 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 TMEM91Q6ZNR0 172 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 NKAIN3Q8N8D7 197 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 OR10K1Q8NGX5 313 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 PHYHIPQ92561 330 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 DMRTB1Q96MA1 342 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 SLITRK2Q9H156 845 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 METTL9Q9H1A3 318 aa13.2□□□□□ -0.3
HDHD3-202ENST00000374180 PPIL3Q9H2H8 161 aaKnown RBP13.2□□□□□ -0.3
HDHD3-202ENST00000374180 EXOSC4Q9NPD3 245 aaKnown RBP13.2□□□□□ -0.3
HDHD3-202ENST00000374180 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 HTR3BO95264 441 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 IFNA2P01563 188 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 CSTBP04080 98 aaKnown RBP13.19□□□□□ -0.3
HDHD3-202ENST00000374180 GABRR1P24046 479 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 FABP5Q01469 135 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 SCN1BQ07699 218 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 OR5D13Q8NGL4 314 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 C8orf46Q8TAG6 207 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 SNX22Q96L94 193 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 WDFY2Q96P53 400 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms