RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 GABRPO00591 440 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 OGG1O15527 345 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 ECDO95905 644 aaPredicted RBP12.05□□□□□ -0.48
SF3B5-201ENST00000367569 HAND1O96004 215 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 KNG1P01042 644 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 RAB3AP20336 220 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 OR3A4PP47883 348 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 PDZK1IP1Q13113 114 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 ZNF273Q14593 569 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 PDCD1Q15116 288 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 GPR157Q5UAW9 335 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 SERPINA12Q8IW75 414 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 PARP16Q8N5Y8 322 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 TPRX1Q8N7U7 411 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 TAF15Q92804 592 aaKnown RBP eCLIP12.05□□□□□ -0.48
SF3B5-201ENST00000367569 GPER1Q99527 375 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 GSTK1Q9Y2Q3 226 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 ZNF281Q9Y2X9 895 aa12.05□□□□□ -0.48
SF3B5-201ENST00000367569 RRP15Q9Y3B9 282 aaKnown RBP12.05□□□□□ -0.48
SF3B5-201ENST00000367569 TRAV8-7A0A075B6U6 113 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CENPVL3A0A0U1RRI6 287 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 TMEM82A0PJX8 343 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CYB5AP00167 134 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CD2P06729 351 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 LIPFP07098 398 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 TMEM225BP0DP42 221 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CCL3L1P16619 93 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CELP19835 753 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CAV3P56539 151 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 EDDM3BP56851 147 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 ZP1P60852 638 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 RPS11P62280 158 aaKnown RBP eCLIP12.04□□□□□ -0.48
SF3B5-201ENST00000367569 SCN1BQ07699 218 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 KISS1Q15726 138 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 DDI2Q5TDH0 399 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 FAM58AQ8N1B3 248 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 ZNF561Q8N587 486 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 Q8N7P7 452 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 NANOGP1Q8N7R0 232 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 LY6G5BQ8NDX9 201 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 OR5D14Q8NGL3 314 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 TNFAIP8L1Q8WVP5 186 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 CNTD2Q9H8S5 307 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 ING3Q9NXR8 418 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 SCN3BQ9NY72 215 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 ERGIC3Q9Y282 383 aa12.04□□□□□ -0.48
SF3B5-201ENST00000367569 TRBV5-5A0A0J9YX44 114 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 HSPB6O14558 160 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 WIPF1O43516 503 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 TK1P04183 234 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 GABRR1P24046 479 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 VHLP40337 213 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 MAP2K4P45985 399 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 SLC35A2P78381 396 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 MED22Q15528 200 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 METAP1DQ6UB28 335 aaPredicted RBP12.03□□□□□ -0.48
SF3B5-201ENST00000367569 SGMS2Q8NHU3 365 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 HAVCR2Q8TDQ0 301 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
SF3B5-201ENST00000367569 NR1H4Q96RI1 486 aaPredicted RBP12.03□□□□□ -0.48
SF3B5-201ENST00000367569 TMED9Q9BVK6 235 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 MND1Q9BWT6 205 aa12.03□□□□□ -0.48
SF3B5-201ENST00000367569 LSM2Q9Y333 95 aaKnown RBP12.03□□□□□ -0.48
SF3B5-201ENST00000367569 CMYA5Q8N3K9 4069 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 IGHV1-69DA0A0B4J2H0 117 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 A0A0U1RQK1 487 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 RNASEK-C17orf49H0YIS7 233 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 PSPNO60542 156 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF737O75373 536 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 KDM4BO94953 1096 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 CDRT1O95170 752 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 IGHV1-69P01742 117 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 HKR1P10072 659 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 HSPA13P48723 471 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 TAS2R43P59537 309 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 RPL31P62899 125 aaKnown RBP12.02□□□□□ -0.49
SF3B5-201ENST00000367569 PPP3R1P63098 170 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 BAMBIQ13145 260 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 RIPK1Q13546 671 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 Q499Y3 187 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 FAM27D1Q5T7N8 215 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF529Q6P280 563 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 RBMS3Q6XE24 437 aaKnown RBP12.02□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
SF3B5-201ENST00000367569 OR4S1Q8NGB4 309 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 C8orf46Q8TAG6 207 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 MYDGFQ969H8 173 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 PPA2Q9H2U2 334 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 HMG20AQ9NP66 347 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF581Q9P0T4 197 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 KPTNQ9Y664 436 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.49
SF3B5-201ENST00000367569 RGS10O43665 173 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms