RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 OR13C7P0DN81 318 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 FOLR3P41439 243 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 STARD6P59095 220 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 PSG4Q00888 419 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 EXT1Q16394 746 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 BTNL8Q6UX41 500 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 GLYATL2Q8WU03 294 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 UBE2J1Q9Y385 318 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-202ENST00000367279 A0A096LPE4 126 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 A0A1W2PPZ6 126 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 ONECUT2O95948 504 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 RFPL3SP0C7P2 107 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 AADACP22760 399 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 CHATP28329 748 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 SNRPEP62304 92 aaKnown RBP10.7□□□□□ -0.7
PTPN7-202ENST00000367279 TMEM187Q14656 261 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 GUK1Q16774 197 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 IGSF11Q5DX21 431 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 AGBL5Q8NDL9 886 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 NAT6Q93015 286 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 FOXB1Q99853 325 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 SYT3Q9BQG1 590 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 PLEKHA2Q9HB19 425 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 WFDC1Q9HC57 220 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 PARP11Q9NR21 331 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 SMCO4Q9NRQ5 59 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
PTPN7-202ENST00000367279 GJE1A6NN92 205 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 SYNGR3O43761 229 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF44P15621 663 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 GDF1P27539 372 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 DUSP1P28562 367 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 OTX1P32242 354 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-202ENST00000367279 RAB5BP61020 215 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 GNMTQ14749 295 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 C10orf91Q5T1B1 145 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 LHFPL2Q6ZUX7 228 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ABHD3Q8WU67 409 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-202ENST00000367279 IMMP1LQ96LU5 166 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 PAPOLGQ9BWT3 736 aaKnown RBP10.69□□□□□ -0.7
PTPN7-202ENST00000367279 TMEM38BQ9NVV0 291 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 LUZP4Q9P127 313 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 FOXD3Q9UJU5 478 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-202ENST00000367279 FREM1Q5H8C1 2179 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 MEX3AA1L020 520 aaKnown RBP10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ST8SIA3O43173 380 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 TCN2P20062 427 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 NPBWR2P48146 333 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF528Q3MIS6 628 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 LGI3Q8N145 548 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 FAM24AA6NFZ4 105 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 COL19A1Q14993 1142 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF239Q16600 458 aaKnown RBP10.69□□□□□ -0.7
PTPN7-202ENST00000367279 AWAT1Q58HT5 328 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 SHEQ5VZ18 495 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 FAM180AQ6UWF9 173 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 LIAT1Q6ZQX7 453 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 SLC35G3Q8N808 338 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 OR10D3Q8NH80 312 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF700Q9H0M5 742 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 OR51B6Q9H340 312 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 TUBD1Q9UJT1 453 aa10.69□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF407Q9C0G0 2248 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 C1orf196B1AJZ1 125 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 RRP8O43159 456 aaKnown RBP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 KLF7O75840 302 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 RAC3P60763 192 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 CALHM1Q8IU99 346 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF611Q8N823 705 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF565Q8N9K5 539 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 IP6K3Q96PC2 410 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 C19orf12Q9NSK7 152 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 PARPBPQ9NWS1 579 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 TIMM10BQ9Y5J6 103 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 GPR137BO60478 399 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ARG1P05089 322 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF806P0C7X5 589 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF14P17017 642 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 CRYGSP22914 178 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 HOXA1P49639 335 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 HIST1H3AP68431 136 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 LPAL2Q16609 132 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 HIST2H3PS2Q5TEC6 136 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 SLC23A3Q6PIS1 610 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 HIST2H3AQ71DI3 136 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ZNF695Q8IW36 515 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 SKA3Q8IX90 412 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 TMEM217Q8N7C4 229 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 TP53RKQ96S44 253 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 WDR54Q9H977 334 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 PUS1Q9Y606 427 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPN7-202ENST00000367279 KPTNQ9Y664 436 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 ZDBF2Q9HCK1 2354 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 GPR37O15354 613 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 TNFSF12O43508 249 aa10.68□□□□□ -0.7
PTPN7-202ENST00000367279 CD5P06127 495 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms