RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SLC38A6Q8IZM9 456 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 GNPNAT1Q96EK6 184 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-204ENST00000367248 GAL3ST2Q9H3Q3 398 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 SLC52A3Q9NQ40 469 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 ZNF835Q9Y2P0 537 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 NUP214P35658 2090 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-204ENST00000367248 OR7C2O60412 319 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 ZP4Q12836 540 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 LRRTM1Q86UE6 522 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 CORO2AQ92828 525 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 CTHRC1Q96CG8 243 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 ST8SIA5O15466 376 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 TRAF3IP2O43734 574 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-204ENST00000367248 UPK3AO75631 287 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 RPL12P30050 165 aaKnown RBP10.18□□□□□ -0.78
SYNE1-204ENST00000367248 USF2Q15853 346 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-204ENST00000367248 OR5D13Q8NGL4 314 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 J3QT63 122 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 UBE2G2P60604 165 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 UBE2KP61086 200 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 FAM74A1Q5RGS3 127 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 OR10AC1Q8NH08 325 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 C10orf35Q96D05 121 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 GPR179Q6PRD1 2367 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 E5RGE8 158 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 ASAH2BP0C7U1 165 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 P2RY6Q15077 328 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 FAM27BQ5VT28 67 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 NSG2Q9Y328 171 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 NINQ8N4C6 2090 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 TRAV39A0A0B4J263 110 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 LALBAP00709 142 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 FPR2P25090 351 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 ACKR3P25106 362 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 SLC16A12Q6ZSM3 486 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 SSX8Q7RTT4 187 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 WFDC3Q8IUB2 231 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 SFT2D1Q8WV19 159 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 TET1Q8NFU7 2136 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 JTBO76095 146 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 ACP1P24666 158 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 CD80P33681 288 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 OR3A1P47881 315 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 FLI1Q01543 452 aaPredicted RBP10.17□□□□□ -0.78
SYNE1-204ENST00000367248 PPP1R32Q7Z5V6 425 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 OR5M8Q8NGP6 311 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 ADIPOR1Q96A54 375 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 PCMT1P22061 227 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 CEACAM3P40198 252 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 ACSM6Q6P461 480 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 TAF9BQ9HBM6 251 aa10.17□□□□□ -0.78
SYNE1-204ENST00000367248 INTS1Q8N201 2190 aaKnown RBP10.17□□□□□ -0.78
SYNE1-204ENST00000367248 A0A0A6YYJ9 748 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 TNXAQ16473 311 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 SVBPQ8N300 66 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 FRRS1LQ9P0K9 344 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 KCNE5Q9UJ90 142 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 PURGQ9UJV8 347 aaKnown RBP10.16□□□□□ -0.78
SYNE1-204ENST00000367248 KCNMB2Q9Y691 235 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 COL6A6A6NMZ7 2263 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 J3KRW8 73 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 TXNL1O43396 289 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 REG1BP48304 166 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 UBE2G1P62253 170 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 NSUN5P2Q63ZY6 315 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 OR2J1Q9GZK6 312 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 IL36GQ9NZH8 169 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 SMPD2O60906 423 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 GCM2O75603 506 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-204ENST00000367248 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 BRS3P32247 399 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 OPRK1P41145 380 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 ZPLD1Q8TCW7 415 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 ZNF75AQ96N20 296 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 GSX2Q9BZM3 304 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 ADAM19Q9H013 955 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 AKIRIN1Q9H9L7 192 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-204ENST00000367248 HILPDAQ9Y5L2 63 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 PNPP00491 289 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 RHOBP62745 196 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 ECSCRQ19T08 205 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 RASL11BQ9BPW5 248 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 SLC7A10Q9NS82 523 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 GNG13Q9P2W3 67 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 PRSS50Q9UI38 385 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 A0A1W2PPE3 182 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 GMDSO60547 372 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 CALCRP30988 508 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 NAA40Q86UY6 237 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 ERGIC1Q969X5 290 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 RNF7Q9UBF6 113 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 PSMB3P49720 205 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 P2RX3P56373 397 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 DHRS9Q9BPW9 319 aa10.16□□□□□ -0.78
SYNE1-204ENST00000367248 PCM1Q15154 2024 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 AHRRA9YTQ3 701 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms