RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 HABP2Q14520 560 aaPredicted RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 KHDC3LQ587J8 217 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNRF4Q8WWF5 429 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 WDR13Q9H1Z4 485 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF331Q9NQX6 463 aaPredicted RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 DEGS1O15121 323 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 NDUFA2O43678 99 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 EML2O95834 649 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 MBPP02686 304 aaPredicted RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 OTX2P32243 289 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 FHITP49789 147 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 H2BFWTQ7Z2G1 175 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 MVB12AQ96EY5 273 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 COA4Q9NYJ1 87 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 MCTS1Q9ULC4 181 aaKnown RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 TRIOBPQ9H2D6 2365 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 M0QZK8 103 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 DVL1O14640 695 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 GGCTO75223 188 aaKnown RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 TTRP02766 147 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 ROM1Q03395 351 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF808Q8N4W9 903 aaPredicted RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 APOA2P02652 100 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 MYOGP15173 224 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 SUMO3P55854 103 aaPredicted RBP14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF154Q13106 437 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 DGAT2L6Q6ZPD8 337 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 OR4A16Q8NH70 328 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 HIPK2Q9H2X6 1198 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 KCNIP2Q9NS61 270 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 LIN7CQ9NUP9 197 aaKnown RBP14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 LHX6Q9UPM6 363 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 PLXNA1Q9UIW2 1896 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 A0A1B0GTQ1 180 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 SLC31A2O15432 143 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 CHST1O43916 411 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 GDF1P27539 372 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 PTGER4P35408 488 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 FAM78BQ5VT40 261 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 OR1N1Q8NGS0 311 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 ASB10Q8WXI3 467 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 H3BMH7 237 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 LMX1BO60663 402 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 GABRA4P48169 554 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 FUT7Q11130 342 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 FOXO1Q12778 655 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 TGIF2-C20orf24A0A0A6YYL0 155 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 A0A1B0GTI1 187 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 NKX2-6A6NCS4 301 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 PDCD6O75340 191 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 NXPH2O95156 264 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 CDS2O95674 445 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 GPR3P46089 330 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 FUT6P51993 359 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 OR8G1Q15617 311 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 ERGIC1Q969X5 290 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 TIMM10BQ9Y5J6 103 aa14.1□□□□□ -0.15
CLSTN1-201ENST00000361311 GREB1Q4ZG55 1949 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 GBF1Q92538 1859 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 DUXBA0A1W2PPF3 345 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 MOSPD3O75425 235 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 IGHV3-9P01782 118 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 OR1D5P58170 312 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 DCDP81605 110 aaKnown RBP14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 PPP1R35Q8TAP8 253 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 ATP5SQ99766 215 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 SLC25A22Q9H936 323 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 VAX2Q9UIW0 290 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 TBX6O95947 436 aaPredicted RBP14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 PGA4P0DJD7 388 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 PGA5P0DJD9 388 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 PTTG1IPP53801 180 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 PARM1Q6UWI2 310 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 APCDD1LQ8NCL9 501 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 MRGPRX1Q96LB2 322 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 GNG12Q9UBI6 72 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 RALGAPA2Q2PPJ7 1873 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF814B7Z6K7 855 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 RPLP1P05386 114 aaKnown RBP14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 OR8U8P0C7N1 319 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 NKAIN1Q4KMZ8 207 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 TMEM240Q5SV17 173 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 GOLT1BQ9Y3E0 138 aa14.09□□□□□ -0.15
CLSTN1-201ENST00000361311 IGHV3-15A0A0B4J1V0 119 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 TRAV34A0A0B4J273 112 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 MPPED1O15442 326 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 TNFSF14O43557 240 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 IL2RAP01589 272 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 DANCRP0C864 163 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 VDAC1P21796 283 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 RUNX1Q01196 453 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 OR4C5Q8NGB2 326 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 OIT3Q8WWZ8 545 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 RARRES2Q99969 163 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 CALHM2Q9HA72 323 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 HDGFL3Q9Y3E1 203 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 KNTC1P50748 2209 aa14.08□□□□□ -0.15
CLSTN1-201ENST00000361311 ETFRF1Q6IPR1 90 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 SMIM8Q96KF7 97 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms