RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM3AP98173 230 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF343Q6P1L6 599 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 BATF2Q8N1L9 274 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 CYB561D1Q8N8Q1 229 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 TMEM208Q9BTX3 173 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 PARD6GQ9BYG4 376 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 COMMD5Q9GZQ3 224 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ARHGAP21Q5T5U3 1957 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 PAFAH1B2P68402 229 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 KISS1Q15726 138 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF660Q6AZW8 331 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 KIRREL2Q6UWL6 708 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 DLK2Q6UY11 383 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF775Q96BV0 537 aaPredicted RBP7.84□□□□□ -1.15
COL6A6-201ENST00000358511 LRRC3BQ96PB8 259 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 PPP1R3EQ9H7J1 279 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 TREM2Q9NZC2 230 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF391Q9UJN7 358 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 CACNA1GO43497 2377 aa7.84□□□□□ -1.15
COL6A6-201ENST00000358511 HTR1DP28221 377 aa7.84□□□□□ -1.16
COL6A6-201ENST00000358511 POLR2GP62487 172 aaKnown RBP eCLIP7.84□□□□□ -1.16
COL6A6-201ENST00000358511 ATP6V1FQ16864 119 aa7.84□□□□□ -1.16
COL6A6-201ENST00000358511 TEX30Q5JUR7 227 aa7.84□□□□□ -1.16
COL6A6-201ENST00000358511 SLC25A26Q70HW3 274 aa7.84□□□□□ -1.16
COL6A6-201ENST00000358511 MTURNQ8N3F0 131 aa7.84□□□□□ -1.16
COL6A6-201ENST00000358511 KCNE3Q9Y6H6 103 aa7.84□□□□□ -1.16
COL6A6-201ENST00000358511 A0A1B0GV90 55 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 NKX6-3A6NJ46 265 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 C1QAP02745 245 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CLDN15P56746 228 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 SHBQ15464 509 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 MPV17LQ2QL34 196 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF547Q8IVP9 402 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 RDH5Q92781 318 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CNTD2Q9H8S5 307 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CBR3O75828 277 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 GAPDHP04406 335 aaKnown RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 HLA-DRB5Q30154 266 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 RGP1Q92546 391 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 C4orf45Q96LM5 186 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CACNG5Q9UF02 275 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 PLXNA3P51805 1871 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 ADAM11O75078 769 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 OR10G4Q8NGN3 311 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 OR10G9Q8NGN4 311 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 OR10G7Q8NGN6 311 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 TP53RKQ96S44 253 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 ALX4Q9H161 411 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 SPINK4O60575 86 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 DHRS3O75911 302 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 HLA-DQB1P01920 261 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 A0A1B0GX78 115 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 PITX3O75364 302 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CLEC18BQ6UXF7 455 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 OR4D9Q8NGE8 314 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 MUCL1Q96DR8 90 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CNRIP1Q96F85 164 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 BCAT2O15382 392 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CCL5P13501 91 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 GLB1P16278 677 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 KIAA0040Q15053 153 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 EXT1Q16394 746 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 DEFB133Q30KQ1 61 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 SMIM21Q3B7S5 101 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 RGS7BPQ6MZT1 257 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 DHRS13Q6UX07 377 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 SCCPDHQ8NBX0 429 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 OR1L6Q8NGR2 347 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 ROBO4Q8WZ75 1007 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 OXGR1Q96P68 337 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 MMP25Q9NPA2 562 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 RNF24Q9Y225 148 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 CCL26Q9Y258 94 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 A0A1B0GV72 72 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 PMS2P1A4D2B8 440 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 GRPP07492 148 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 ARR3P36575 388 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF816Q0VGE8 651 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-201ENST00000358511 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 WFIKKN1Q96NZ8 548 aa7.83□□□□□ -1.16
COL6A6-201ENST00000358511 LIMK1P53667 647 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM215Q68D42 235 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 OR10X1Q8NGY0 326 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM147Q9BVK8 224 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 HSF4Q9ULV5 492 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 CTSDP07339 412 aaPredicted RBP7.82□□□□□ -1.16
COL6A6-201ENST00000358511 CEBPDP49716 269 aaPredicted RBP7.82□□□□□ -1.16
COL6A6-201ENST00000358511 ERVFRD-1P60508 538 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 MRGPREQ86SM8 312 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 KIAA1456Q9P272 454 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 NPTNQ9Y639 398 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 PLXNB1O43157 2135 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 SCRG1O75711 98 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 PIAS2O75928 621 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 CYB5R3P00387 301 aaPredicted RBP7.82□□□□□ -1.16
COL6A6-201ENST00000358511 PPICP45877 212 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 NOXO1Q8NFA2 376 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 OR5A2Q8NGI9 324 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms