RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 A0A1B0GW55 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 RNF223E7ERA6 249 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 TNFRSF13BO14836 293 aaPredicted RBP12.41□□□□□ -0.42
CCNE1-202ENST00000357943 CRTAPO75718 401 aaPredicted RBP12.41□□□□□ -0.42
CCNE1-202ENST00000357943 BPNT1O95861 308 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 KNG1P01042 644 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 UBBP0CG47 229 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L2P0CJ85 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L3P0CJ86 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L4P0CJ87 422 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L5P0CJ88 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L6P0CJ89 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L7P0CJ90 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 GTF2F2P13984 249 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 PLA2G7Q13093 441 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 UNC119Q13432 240 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 GPR176Q14439 515 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 PDCD1Q15116 288 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 C2orf76Q3KRA6 126 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4L9Q6RFH8 374 aaPredicted RBP12.41□□□□□ -0.42
CCNE1-202ENST00000357943 MUC20Q8N307 709 aaPredicted RBP12.41□□□□□ -0.42
CCNE1-202ENST00000357943 CD177Q8N6Q3 437 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 OR51T1Q8NGJ9 327 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 CCL13Q99616 98 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 DUX4Q9UBX2 424 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 ZNF222Q9UK12 451 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 ST3GAL6Q9Y274 331 aa12.41□□□□□ -0.42
CCNE1-202ENST00000357943 TMEM14DPA8MWL7 114 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 PAHP00439 452 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 MGMTP16455 207 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 GABRA2P47869 451 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 ZNF146Q15072 292 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 KCNJ8Q15842 424 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 IDNKQ5T6J7 187 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 DCDC5Q6ZRR9 648 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 SPICQ8N5J4 248 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 MAPK1IP1LQ8NDC0 245 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 SLIRPQ9GZT3 109 aaKnown RBP12.4□□□□□ -0.42
CCNE1-202ENST00000357943 CST11Q9H112 138 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 ZNF581Q9P0T4 197 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 GEMIN2O14893 280 aaKnown RBP12.4□□□□□ -0.42
CCNE1-202ENST00000357943 MPIG6BO95866 241 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 SELLP14151 372 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 SNRPBP14678 240 aaKnown RBP12.4□□□□□ -0.42
CCNE1-202ENST00000357943 USF1P22415 310 aaPredicted RBP12.4□□□□□ -0.42
CCNE1-202ENST00000357943 IL2RGP31785 369 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 PRDX2P32119 198 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 BMXP51813 675 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 SPIN3Q5JUX0 258 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 FIP1L1Q6UN15 594 aaKnown RBP12.4□□□□□ -0.42
CCNE1-202ENST00000357943 ZNF788Q6ZQV5 615 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 KCNG3Q8TAE7 436 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 REG4Q9BYZ8 158 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 SELENOIQ9C0D9 397 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 PCDHB16Q9NRJ7 776 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
CCNE1-202ENST00000357943 CTSZQ9UBR2 303 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 OR5V1Q9UGF6 321 aa12.4□□□□□ -0.42
CCNE1-202ENST00000357943 TMEM272A0A1B0GTI8 110 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 LDLRAD4O15165 306 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 ADAM20O43506 726 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 NDUFA2O43678 99 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 CLPXO76031 633 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 HAND1O96004 215 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 IGHV2-5P01817 119 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 RPS2P15880 293 aaKnown RBP12.39□□□□□ -0.43
CCNE1-202ENST00000357943 RORCP51449 518 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 RBM11P57052 281 aaKnown RBP12.39□□□□□ -0.43
CCNE1-202ENST00000357943 LMO4P61968 165 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 TAF9Q16594 264 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 NHLRC3Q5JS37 347 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
CCNE1-202ENST00000357943 CROCCP3Q8IVE0 287 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 CIARTQ8N365 385 aaPredicted RBP12.39□□□□□ -0.43
CCNE1-202ENST00000357943 ZNRF1Q8ND25 227 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 MRPS24Q96EL2 167 aaKnown RBP12.39□□□□□ -0.43
CCNE1-202ENST00000357943 Q96M66 194 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 GAFA1Q96PS6 74 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 PATZ1Q9HBE1 687 aaKnown RBP12.39□□□□□ -0.43
CCNE1-202ENST00000357943 PCDHB10Q9UN67 800 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 MAB21L2Q9Y586 359 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 ITPR3Q14573 2671 aa12.39□□□□□ -0.43
CCNE1-202ENST00000357943 FCN3O75636 299 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 WNT2P09544 360 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 EFNB2P52799 333 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 CAPZA1P52907 286 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 SEC61A1P61619 476 aaKnown RBP12.38□□□□□ -0.43
CCNE1-202ENST00000357943 COL10A1Q03692 680 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 SCN1BQ07699 218 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 Q6P435 159 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 OR2W3Q7Z3T1 314 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 OR5H6Q8NGV6 325 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 LGALS14Q8TCE9 139 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 SDSLQ96GA7 329 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 DNTTIP1Q9H147 329 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms