RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZBTB49Q6ZSB9 765 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 OR5D13Q8NGL4 314 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 C10orf35Q96D05 121 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 PDCD1LG2Q9BQ51 273 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 FAM234AQ9H0X4 552 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 MEGF9Q9H1U4 602 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 PPA2Q9H2U2 334 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 SF3B6Q9Y3B4 125 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 TRBV2A0A0J9YWF9 115 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 ODF3BA8MYP8 253 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 TSPAN9O75954 239 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 CLPXO76031 633 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 PAHP00439 452 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 CHRM2P08172 466 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 LIMS3P0CW19 117 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 LIMS4P0CW20 117 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 PRKACAP17612 351 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 OR3A1P47881 315 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 RBP2P50120 134 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 ATP1B3P54709 279 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 RPL15P61313 204 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 PDZK1IP1Q13113 114 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 DOC2BQ14184 412 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 MIDNQ504T8 468 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 PLA1AQ53H76 456 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 SLC35E4Q6ICL7 350 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 BRICD5Q6PL45 260 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 CCBE1Q6UXH8 406 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 TREML4Q6UXN2 200 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 KCTD20Q7Z5Y7 419 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 OR8H2Q8N162 312 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 FAM58AQ8N1B3 248 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 CCDC54Q8NEL0 328 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 DNAAF1Q8NEP3 725 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 OR13C3Q8NGS6 347 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 OPALINQ96PE5 141 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 C16orf95Q9H693 158 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 HHLA2Q9UM44 414 aa13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 CAB39Q9Y376 341 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 SIRT4Q9Y6E7 314 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 TET2Q6N021 2002 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-201ENST00000355572 A0A1B0GUS0 222 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 FAM90A8PA6NJQ4 464 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 SIRPB1O00241 398 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 ZNF20P17024 532 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 GDNFP39905 211 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 RAB13P51153 203 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 MTCP1P56278 107 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 ZP1P60852 638 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 IL18R1Q13478 541 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 RIPK1Q13546 671 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 FBLN7Q53RD9 439 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 DHRS7BQ6IAN0 325 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 GDPGP1Q6ZNW5 385 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 OR51A2Q8NGJ7 313 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 CNIH3Q8TBE1 160 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 ORAI1Q96D31 301 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 SNX22Q96L94 193 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 HMG20AQ9NP66 347 aa13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 MRPS18AQ9NVS2 196 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-201ENST00000355572 BAG2O95816 211 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 LALBAP00709 142 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 SERPINA3P01011 423 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 ZNF728P0DKX0 622 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 IGHV1-8P0DP01 117 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 ETV1P50549 477 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 ZNF146Q15072 292 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 LRRC75BQ2VPJ9 315 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 OR2G6Q5TZ20 316 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 LPCAT4Q643R3 524 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 LHFPL2Q6ZUX7 228 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 SYS1Q8N2H4 156 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 ZNF676Q8N7Q3 588 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 ZNF581Q9P0T4 197 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 GSTK1Q9Y2Q3 226 aa13.53□□□□□ -0.24
PDLIM7-201ENST00000355572 KDM4BO94953 1096 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 TSPAN15O95858 294 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 OR2H2O95918 312 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 MT-ND2P03891 347 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 GABRR1P24046 479 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 ACTA2P62736 377 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 ACTG2P63267 376 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 GRK1Q15835 563 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 LRRC36Q1X8D7 754 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 ZNF626Q68DY1 528 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 Q6P435 159 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 C10orf67Q8IYJ2 551 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 RPS4Y2Q8TD47 263 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 ZCCHC4Q9H5U6 513 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 HEXA-AS1Q9H8Q6 139 aa13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 SEBOXQ9HB31 216 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 FGF20Q9NP95 211 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-201ENST00000355572 VWFP04275 2813 aa13.51□□□□□ -0.25
PDLIM7-201ENST00000355572 MEGF8Q7Z7M0 2845 aa13.51□□□□□ -0.25
PDLIM7-201ENST00000355572 ARG1P05089 322 aa13.51□□□□□ -0.25
PDLIM7-201ENST00000355572 PRKACBP22694 351 aa13.51□□□□□ -0.25
PDLIM7-201ENST00000355572 RAB40BQ12829 278 aa13.51□□□□□ -0.25
PDLIM7-201ENST00000355572 CDK5R1Q15078 307 aa13.51□□□□□ -0.25
PDLIM7-201ENST00000355572 ZNF691Q5VV52 312 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms