RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 B3GALT5-AS1P59052 145 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 FAM3AP98173 230 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 EIF3IQ13347 325 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 OSR2Q8N2R0 312 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 UBAC2Q8NBM4 344 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 OR14L1PQ8NHC6 308 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 HS3ST6Q96QI5 342 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 BIN3Q9NQY0 253 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 PATE3B3GLJ2 98 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 APOC1P02654 83 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 HEXAP06865 529 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 AADACP22760 399 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 SNRPEP62304 92 aaKnown RBP15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 HABP2Q14520 560 aaPredicted RBP15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 CEACAM16Q2WEN9 425 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 SUMF1Q8NBK3 374 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 C10orf35Q96D05 121 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF700Q9H0M5 742 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 HSF4Q9ULV5 492 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 E5RGE8 158 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 TERTO14746 1132 aaKnown RBP15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 CBR3O75828 277 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 CFIP05156 583 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 CLDN15P56746 228 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 C9orf135Q5VTT2 229 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 RTL6Q6ICC9 239 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 AAED1Q7RTV5 226 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 AGBL5Q8NDL9 886 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 LYPD6BQ8NI32 183 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 C18orf12Q96KH6 178 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 EIF5A2Q9GZV4 153 aaKnown RBP15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 WNT5BQ9H1J7 359 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 NSG2Q9Y328 171 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 STARD10Q9Y365 291 aa15.65■□□□□ 0.1
PTP4A3-202ENST00000349124 AHCTF1Q8WYP5 2266 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 NSG1A0A0A6YYJ2 146 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 TRAPPC6AO75865 159 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 OR7C1O76099 320 aaPredicted RBP15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 SNCAP37840 140 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 RAC3P60763 192 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 WIPI1Q5MNZ9 446 aaPredicted RBP15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 FBXW12Q6X9E4 464 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 LIAT1Q6ZQX7 453 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 SKA3Q8IX90 412 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 GPR137CQ8N3F9 429 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 ZNF845Q96IR2 970 aaPredicted RBP15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 WDR54Q9H977 334 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 CRIM1Q9NZV1 1036 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 TIMM10BQ9Y5J6 103 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 ECI1P42126 302 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 GGNQ86UU5 652 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 DMBX1Q8NFW5 382 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 ABHD3Q8WU67 409 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 SFT2D1Q8WV19 159 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 GALNT14Q96FL9 552 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 PLEKHA2Q9HB19 425 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 SPACA1Q9HBV2 294 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 FAM212BQ9NTI7 297 aaPredicted RBP15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 FBXO7Q9Y3I1 522 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 ZNF407Q9C0G0 2248 aa15.64■□□□□ 0.09
PTP4A3-202ENST00000349124 CCDC163A0A0D9SF12 145 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 OR6C6A6NF89 314 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 ZNF716A6NP11 495 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 DANCRP0C864 163 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 CCL2P13500 99 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 DTYMKP23919 212 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 MLF1P58340 268 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 GUK1Q16774 197 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 PLCXD3Q63HM9 321 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 SLC35G3Q8N808 338 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 ABHD14AQ9BUJ0 271 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 ZNF442Q9H7R0 627 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 BCO1Q9HAY6 547 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 FREM1Q5H8C1 2179 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 H7C1Q1 480 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 PRH1P02810 166 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 OMGP23515 440 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 CNN3Q15417 329 aaKnown RBP15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 SLC25A26Q70HW3 274 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 HPSE2Q8WWQ2 592 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 INTS12Q96CB8 462 aaKnown RBP15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 FOXB1Q99853 325 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 ARV1Q9H2C2 271 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 SMCO4Q9NRQ5 59 aa15.63■□□□□ 0.09
PTP4A3-202ENST00000349124 A0A1W2PPE3 182 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 FAM24AA6NFZ4 105 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 NXPH3O95157 252 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 CST2P09228 141 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 EDN3P14138 238 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 CAMLGP49069 296 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 CLINT1Q14677 625 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 EXT1Q16394 746 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 AWAT1Q58HT5 328 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 TMEM42Q69YG0 159 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 ASCL4Q6XD76 172 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 CPEB3Q8NE35 698 aaKnown RBP15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 HIST1H2BAQ96A08 127 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 CLDN23Q96B33 292 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 OR2H1Q9GZK4 316 aa15.62■□□□□ 0.09
PTP4A3-202ENST00000349124 hCG_38984A0A1B0GV85 526 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms