RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 CALRP27797 417 aaKnown RBP17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 IL17RELQ6ZVW7 336 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 C1QL2Q7Z5L3 287 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 NKAIN3Q8N8D7 197 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 NUDT16L1Q9BRJ7 211 aaKnown RBP17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 PPIL3Q9H2H8 161 aaKnown RBP17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 RHOFQ9HBH0 211 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 VCX3AQ9NNX9 186 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 HMG20AQ9NP66 347 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 METRNQ9UJH8 293 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 CDC42EP3Q9UKI2 254 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 INSIG2Q9Y5U4 225 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 WNK2Q9Y3S1 2297 aa17.27■□□□□ 0.36
SMARCB1-202ENST00000344921 SONP18583 2426 aaKnown RBP17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 A6NHS1 94 aa17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 CDRT1O95170 752 aa17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 DUSP1P28562 367 aa17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 ASCC1Q8N9N2 400 aaKnown RBP17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 OR10K1Q8NGX5 313 aa17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 PHYHIPQ92561 330 aa17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 METTL9Q9H1A3 318 aa17.27■□□□□ 0.35
SMARCB1-202ENST00000344921 IGHV2-70DA0A0C4DH43 119 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 C22orf46C9J442 243 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 J3QLI3 93 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 GPR37O15354 613 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 ENSAO43768 121 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 FCN3O75636 299 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 HTR3BO95264 441 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 ECDO95905 644 aaPredicted RBP17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 CSTBP04080 98 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 CHRM2P08172 466 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 GP2P55259 537 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 COL10A1Q03692 680 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 CHRFAM7AQ494W8 412 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 SPIN3Q5JUX0 258 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 MUL1Q969V5 352 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 MRI1Q9BV20 369 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 CNTD2Q9H8S5 307 aa17.26■□□□□ 0.35
SMARCB1-202ENST00000344921 HAND1O96004 215 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 MTNR1BP49286 362 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 BMXP51813 675 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 GLT8D1Q68CQ7 371 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 CDH26Q8IXH8 852 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 NR1H4Q96RI1 486 aaPredicted RBP17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 ZNF696Q9H7X3 374 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 LPAR3Q9UBY5 353 aa17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 MRPS28Q9Y2Q9 187 aaKnown RBP17.25■□□□□ 0.35
SMARCB1-202ENST00000344921 NSD1Q96L73 2696 aaPredicted RBP17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 SH2D1BO14796 132 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 CRLF1O75462 422 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 CAV3P56539 151 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 PAX2Q02962 417 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 SCN1BQ07699 218 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 ZNF146Q15072 292 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 AWAT2Q6E213 333 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 TMPRSS13Q9BYE2 586 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 EXOSC4Q9NPD3 245 aaKnown RBP17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 AUP1Q9Y679 476 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 KIR2DS1A0A191URI9 304 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 ADRA2CP18825 462 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 SERPINA2P20848 420 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 SRP14P37108 136 aaKnown RBP17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 FGF12P61328 243 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 C11orf91Q3C1V1 193 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 SLC22A6Q4U2R8 563 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 SYT6Q5T7P8 510 aaPredicted RBP17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 LRRTM1Q86UE6 522 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 FOXRED1Q96CU9 486 aaPredicted RBP17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 PCDHB16Q9NRJ7 776 aa17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 RPUSD1Q9UJJ7 312 aaKnown RBP17.24■□□□□ 0.35
SMARCB1-202ENST00000344921 TK1P04183 234 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 LIPFP07098 398 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 ZNF44P15621 663 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 GABRR1P24046 479 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 ELP2Q6IA86 826 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 GLIPR1L1Q6UWM5 242 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 ASCL4Q6XD76 172 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 UQCC2Q9BRT2 126 aa17.23■□□□□ 0.35
SMARCB1-202ENST00000344921 TRDV1A0A1B0GX56 115 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 SIRPB1O00241 398 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 ZNF780AO75290 641 aaPredicted RBP17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 AVPP01185 164 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 PPIAL4GP0DN37 164 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 OR4D6Q8NGJ1 314 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 DCTN5Q9BTE1 182 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 FAM234AQ9H0X4 552 aa17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 FN1P02751 2386 aaKnown RBP17.22■□□□□ 0.35
SMARCB1-202ENST00000344921 A0A1W2PQ09 198 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 K7N7A8 449 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 OR2H2O95918 312 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 PAX8Q06710 450 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 GPR176Q14439 515 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 PDCD1Q15116 288 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 CD200R1LQ6Q8B3 271 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 OSR2Q8N2R0 312 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 TEX29Q8N6K0 151 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 DACT3Q96B18 629 aaPredicted RBP17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 SNX22Q96L94 193 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 IL36GQ9NZH8 169 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 STUB1Q9UNE7 303 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms