RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CADP27708 2225 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 NKX2-5P52952 324 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 RHOUQ7L0Q8 258 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 SUMF2Q8NBJ7 301 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PCGF1Q9BSM1 259 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 MPDZO75970 2070 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PGA4P0DJD7 388 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PGA3P0DJD8 388 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 LIMK1P53667 647 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 ZNF770Q6IQ21 691 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 ADTRPQ96IZ2 230 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 FAAP24Q9BTP7 215 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 SONP18583 2426 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 FNDC1Q4ZHG4 1894 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PPIAL4EA0A075B759 164 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PPIAL4DF5H284 164 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 AGPAT2O15120 278 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 GMDSO60547 372 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 TPPPO94811 219 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 CLEC3BP05452 202 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PPIAL4FP0DN26 164 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 DCTDP32321 178 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 HTR2BP41595 481 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 ASCL1P50553 236 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 LINC00596Q86U02 117 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 GPX7Q96SL4 187 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 MS4A7Q9GZW8 240 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PPIAL4AQ9Y536 164 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 IGF2RP11717 2491 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 GZMHP20718 246 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 UBAC2Q8NBM4 344 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 MALSU1Q96EH3 234 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 PERPQ96FX8 193 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 CCL19Q99731 98 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 ZNF703Q9H7S9 590 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 DSPPQ9NZW4 1301 aa14.34□□□□□ -0.11
SMARCA4-201ENST00000344626 F8W036 122 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 KLF7O75840 302 aaPredicted RBP14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 LY86O95711 162 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 GNLYP22749 145 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 PSG4Q00888 419 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 ZNF816Q0VGE8 651 aaPredicted RBP14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 FCN2Q15485 313 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 FAM209AQ5JX71 171 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 SPANXN5Q5MJ07 72 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 SMIM15Q7Z3B0 74 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 OR4S1Q8NGB4 309 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 OR13D1Q8NGV5 346 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 APH1BQ8WW43 257 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 GPR137Q96N19 417 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 FRRS1LQ9P0K9 344 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 PSG11Q9UQ72 335 aa14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 SNRNP200O75643 2136 aaKnown RBP14.33□□□□□ -0.11
SMARCA4-201ENST00000344626 OOEPA6NGQ2 149 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 C17orf51A8MQB3 221 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 APOC3P02656 99 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 DOCK7Q96N67 2140 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 BOLA2-SMG1P6H3BVE0 249 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 IL11P20809 199 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 GABRA4P48169 554 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 MRGPRDQ8TDS7 321 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 FAM210AQ96ND0 272 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 OR4A8P0C604 315 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 AVPI1Q5T686 147 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 OR14K1Q8NGZ2 314 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 ADAMTS17Q8TE56 1095 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 PINX1Q96BK5 328 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 CHCHD2Q9Y6H1 151 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 IGHV3-13P01766 116 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 IGHV3-7P01780 117 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 HPNP05981 417 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 CRYBB2P43320 205 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 ZNF674Q2M3X9 581 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 MPV17LQ2QL34 196 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 MFSD4AQ8N468 514 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 TMEM230Q96A57 120 aa14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 PLEKHB1Q9UF11 243 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-201ENST00000344626 CSN1S1P47710 185 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 ZNF486Q96H40 463 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 MESP1Q9BRJ9 268 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 FKBP11Q9NYL4 201 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 PCDHGA9Q9Y5G4 932 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 NOTCH3Q9UM47 2321 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 CA11O75493 328 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 OR3A1P47881 315 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 HTD2P86397 168 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 HLXQ14774 488 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 C6orf201Q7Z4U5 140 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 COMMD7Q86VX2 200 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 THNSL2Q86YJ6 484 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 ZDHHC8Q9ULC8 765 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 PDCD11Q14690 1871 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 LOC102723996A0A087X1L8 192 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 CRYM-AS1A6NIL9 109 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 SLC25A47Q6Q0C1 308 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 FAM213BQ8TBF2 198 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 CHST5Q9GZS9 411 aa14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 RANGRFQ9HD47 186 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-201ENST00000344626 DEFB108AA8MXU0 73 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms