RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZNF649Q9BS31 505 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 CHIAQ9BZP6 476 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 A6NHS1 94 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 CLIC3O95833 236 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 HAND1O96004 215 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 IGHV4-59P01825 116 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 HCKP08631 526 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 LIMS3P0CW19 117 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 LIMS4P0CW20 117 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SAA4P35542 130 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 IER3P46695 156 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 EDDM3BP56851 147 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 PDZK1IP1Q13113 114 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SPIN3Q5JUX0 258 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SERPINA12Q8IW75 414 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 ZSCAN4Q8NAM6 433 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 OR5D14Q8NGL3 314 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 DYRK2Q92630 601 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SNX22Q96L94 193 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 PDCD1LG2Q9BQ51 273 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 HEXA-AS1Q9H8Q6 139 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 RBFOX1Q9NWB1 397 aaKnown RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 CHCHD3Q9NX63 227 aaKnown RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 PCDHGB5Q9Y5G0 923 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 TENM1Q9UKZ4 2725 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 POM121CA8CG34 1229 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 E9PI62 339 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SPRY1O43609 319 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 ZNF737O75373 536 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 PRKACAP17612 351 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 BCL3P20749 454 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 ERVFRD-1P60508 538 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 CCDC58Q4VC31 144 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 RPL22L1Q6P5R6 122 aaKnown RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 OR8H2Q8N162 312 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 PPP1R35Q8TAP8 253 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 RFT1Q96AA3 541 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 SEBOXQ9HB31 216 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 ZNRD1Q9P1U0 126 aa13.15□□□□□ -0.3
ATG4B-201ENST00000344376 EXOSC1Q9Y3B2 195 aaKnown RBP13.15□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 SULT1B1O43704 296 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 ALX3O95076 343 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 GABRR1P24046 479 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 NPBWR2P48146 333 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 RAG2P55895 527 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 MIDNQ504T8 468 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 PNKDQ8N490 385 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 PARP16Q8N5Y8 322 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 RHOFQ9HBH0 211 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 SCOCQ9UIL1 159 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 DIMT1Q9UNQ2 313 aaKnown RBP13.14□□□□□ -0.31
ATG4B-201ENST00000344376 HSPE1-MOB4S4R3N1 261 aa13.14□□□□□ -0.31
ATG4B-201ENST00000344376 MAGEB3O15480 346 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 CD2P06729 351 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 CCL3L1P16619 93 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 CAPGP40121 348 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 ETV1P50549 477 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 ADARB1P78563 741 aaKnown RBP13.13□□□□□ -0.31
ATG4B-201ENST00000344376 EDDM3AQ14507 147 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 ZNF273Q14593 569 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 ZNF146Q15072 292 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 GRK1Q15835 563 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 GDPGP1Q6ZNW5 385 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 SAXO1Q8IYX7 474 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 C8orf59Q8N0T1 100 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-201ENST00000344376 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 OR5R1Q8NH85 324 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 SGMS2Q8NHU3 365 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 GPR148Q8TDV2 347 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 TMEM80Q96HE8 168 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 SPACA5Q96QH8 159 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 HMG20AQ9NP66 347 aa13.13□□□□□ -0.31
ATG4B-201ENST00000344376 EXOSC4Q9NPD3 245 aaKnown RBP13.13□□□□□ -0.31
ATG4B-201ENST00000344376 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 SH2D1BO14796 132 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 GPR137BO60478 399 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 KDM4BO94953 1096 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 NDUFA7O95182 113 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 RAB3AP20336 220 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 MDKP21741 143 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-201ENST00000344376 OMGP23515 440 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 DUSP1P28562 367 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 SNU13P55769 128 aaKnown RBP13.12□□□□□ -0.31
ATG4B-201ENST00000344376 LGALS4P56470 323 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 MEF2CQ06413 473 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-201ENST00000344376 CDK5R1Q15078 307 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 HCP5Q6MZN7 132 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 VPREB3Q9UKI3 123 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 MMP24Q9Y5R2 645 aa13.12□□□□□ -0.31
ATG4B-201ENST00000344376 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms