RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 OR1A2Q9Y585 309 aa7.15□□□□□ -1.27
ATG4A-201ENST00000343524 VPS13AQ96RL7 3174 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 C4orf51C9J302 202 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 H7BYZ3 331 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 MMP23AO75900 390 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 TOMM40O96008 361 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 KNG1P01042 644 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 PI3P19957 117 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 GABRA3P34903 492 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 GALR1P47211 349 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 UBE2G2P60604 165 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 BTN3A2P78410 334 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 SRPXP78539 464 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 LCN2P80188 198 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 HYAL1Q12794 435 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 EIF3IQ13347 325 aaKnown RBP7.14□□□□□ -1.27
ATG4A-201ENST00000343524 UBE2V1Q13404 147 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 P2RY6Q15077 328 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF141Q15928 474 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 C1QL3Q5VWW1 255 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 SP5Q6BEB4 398 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-201ENST00000343524 CYP2G1PQ6ZSU1 146 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF547Q8IVP9 402 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 CMTM1Q8IZ96 169 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 OR56B2PQ8NGI1 322 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 OR2A1Q8NGT9 310 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 BOD1Q96IK1 185 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 LPAR4Q99677 370 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 SPIN2AQ99865 258 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 SPIN2BQ9BPZ2 258 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-201ENST00000343524 TPSD1Q9BZJ3 242 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 C6orf106Q9H6K1 298 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-201ENST00000343524 KIR3DX1Q9H7L2 352 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 SCN2AQ99250 2005 aa7.14□□□□□ -1.27
ATG4A-201ENST00000343524 WDR87Q6ZQQ6 2873 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 IGKV1-8A0A0C4DH67 115 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SCDO00767 359 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 LATO43561 262 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 B3GALT2O43825 422 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 GLRA1P23415 457 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 EMDP50402 254 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 ELLP55199 621 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 TPPP2P59282 170 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 RPS15AP62244 130 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 DEFB103AP81534 67 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 GPM6BQ13491 265 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 RUNX2Q13950 521 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 ENDOGQ14249 297 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 BATFQ16520 125 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 WBP2NLQ6ICG8 309 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 TOMM20LQ6UXN7 152 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 LGI3Q8N145 548 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 FBXL14Q8N1E6 418 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 OR2C3Q8N628 320 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 OR5D14Q8NGL3 314 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 NT5CQ8TCD5 201 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 HOXB13Q92826 284 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 MRPL24Q96A35 216 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 DDIT4LQ96D03 193 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 TSPAN32Q96QS1 320 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM59Q9BXS4 323 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 LPAR5Q9H1C0 372 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 OR51I2Q9H344 312 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 PLEKHF2Q9H8W4 249 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SEPSECSQ9HD40 501 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 PGPEP1Q9NXJ5 209 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 LRP12Q9Y561 859 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SPTBN2O15020 2390 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SCN10AQ9Y5Y9 1956 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 RNF212BA8MTL3 300 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SERPINE3A8MV23 424 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 HIDE1A8MVS5 230 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 KLF8O95600 359 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 CDS2O95674 445 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 PNPP00491 289 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 PCCBP05166 539 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 ASAH2BP0C7U1 165 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 MMP9P14780 707 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SELEP16581 610 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 TUBG1P23258 451 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SNU13P55769 128 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 CARD18P57730 90 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 CCL20P78556 96 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 SLC25A24Q6NUK1 477 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 LINC01555Q8NAE3 123 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF738Q8NE65 137 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 VN1R2Q8NFZ6 395 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 ELOVL1Q9BW60 279 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 PHF7Q9BWX1 381 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 S1PR5Q9H228 398 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 NAA60Q9H7X0 242 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 MMP25Q9NPA2 562 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM9BQ9NQ34 198 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 APOBEC3BQ9UH17 382 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 RCL1Q9Y2P8 373 aaKnown RBP7.13□□□□□ -1.27
ATG4A-201ENST00000343524 INSL5Q9Y5Q6 135 aa7.13□□□□□ -1.27
ATG4A-201ENST00000343524 A0A0U1RQV5 110 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 SRSF10O75494 262 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms