RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CLCC1Q96S66 551 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 CCNL2Q96S94 520 aaPredicted RBP10.45□□□□□ -0.74
USP1-201ENST00000339950 LUZP4Q9P127 313 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 AK3Q9UIJ7 227 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 THADAQ6YHU6 1953 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 PMS2P1A4D2B8 440 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 SFT2D2O95562 160 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 SERPINE2P07093 398 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 PLP2Q04941 152 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 TESK1Q15569 626 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 MPPED2Q15777 294 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 OR8G2PQ6IF36 304 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 OR9K2Q8NGE7 335 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 NAT6Q93015 286 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 MARVELD3Q96A59 401 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 UQCC1Q9NVA1 299 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 PLCE1Q9P212 2302 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 IGKV1-9A0A0C4DH69 117 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 SMCO3A2RU48 225 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 FTCDNL1E5RQL4 147 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 YIF1AO95070 293 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 RFPL3SP0C7P2 107 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 GABRA4P48169 554 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 LPCAT3Q6P1A2 487 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 VHLLQ6RSH7 139 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 TMPRSS7Q7RTY8 843 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 LDLRAD3Q86YD5 345 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
USP1-201ENST00000339950 OR56B2PQ8NGI1 322 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 OR2G3Q8NGZ4 309 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 POC1BQ8TC44 478 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 RHOVQ96L33 236 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 SPSB2Q99619 263 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 SIRPB1O00241 398 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 S100A8P05109 93 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 RUNX1Q01196 453 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 HFEQ30201 348 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 PIK3IP1Q96FE7 263 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 TOLLIPQ9H0E2 274 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 ZNF286AQ9HBT8 521 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 SPG11Q96JI7 2443 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 MED13Q9UHV7 2174 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 TUSC2O75896 110 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 FABP4P15090 132 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 NPBWR2P48146 333 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 P2RY4P51582 365 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 GRB2P62993 217 aaKnown RBP10.44□□□□□ -0.74
USP1-201ENST00000339950 COL13A1Q5TAT6 717 aaPredicted RBP10.44□□□□□ -0.74
USP1-201ENST00000339950 BSCL2Q96G97 398 aaPredicted RBP10.44□□□□□ -0.74
USP1-201ENST00000339950 SYT3Q9BQG1 590 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 FAM212BQ9NTI7 297 aaPredicted RBP10.44□□□□□ -0.74
USP1-201ENST00000339950 TICRRQ7Z2Z1 1910 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 ZNF735P0CB33 412 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 PGA4P0DJD7 388 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 PGA3P0DJD8 388 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 ACKR3P25106 362 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 PTGER4P35408 488 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 LPAR6P43657 344 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 ARG2P78540 354 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 ALKBH6Q3KRA9 238 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 PABPC1L2AQ5JQF8 200 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 RABEPKQ7Z6M1 372 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 SPEM1Q8N4L4 309 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 OR10D3Q8NH80 312 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 B3GAT1Q9P2W7 334 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 IL36RNQ9UBH0 155 aa10.44□□□□□ -0.74
USP1-201ENST00000339950 A0A1B0GTI1 187 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 DHRS3O75911 302 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 SYNGR4O95473 234 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 HOXA1P49639 335 aaPredicted RBP10.43□□□□□ -0.74
USP1-201ENST00000339950 ZNF561Q8N587 486 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 ERGIC1Q969X5 290 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 PRRX2Q99811 253 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 MED9Q9NWA0 146 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 TK1P04183 234 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 NR2C1P13056 603 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 ECH1Q13011 328 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 RFESDQ8TAC1 157 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 AQP3Q92482 292 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 FOXB1Q99853 325 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 A0A1W2PPE2 198 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 WIPF3A6NGB9 483 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 DNASE2O00115 360 aaPredicted RBP10.43□□□□□ -0.74
USP1-201ENST00000339950 CYB5BO43169 146 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 GSTP1P09211 210 aaKnown RBP10.43□□□□□ -0.74
USP1-201ENST00000339950 FBP1P09467 338 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 CHATP28329 748 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 EPHA8P29322 1005 aaPredicted RBP10.43□□□□□ -0.74
USP1-201ENST00000339950 EIF1P41567 113 aaKnown RBP10.43□□□□□ -0.74
USP1-201ENST00000339950 CYB561P49447 251 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 OR2T2Q6IF00 324 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 PLPP5Q8NEB5 264 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 EMG1Q92979 244 aaKnown RBP10.43□□□□□ -0.74
USP1-201ENST00000339950 DUSP23Q9BVJ7 150 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 SLC17A5Q9NRA2 495 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 SH3BGRL2Q9UJC5 107 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 GAB2Q9UQC2 676 aa10.43□□□□□ -0.74
USP1-201ENST00000339950 NPIPB7O75200 414 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms