RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KMT2EQ8IZD2 1858 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 A0A0G2JMM0 328 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 A0A1W2PPB8 328 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 A0A1W2PRS3 328 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 KIR3DP1A8MWS1 328 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 CAMLGP49069 296 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 CSNK2A1P68400 391 aaPredicted RBP16.35■□□□□ 0.21
PSPC1-201ENST00000338910 SSPNQ14714 243 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 CSNK2A3Q8NEV1 391 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 UCN2Q96RP3 112 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 FBXO7Q9Y3I1 522 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 LSM5Q9Y4Y9 91 aaKnown RBP16.35■□□□□ 0.21
PSPC1-201ENST00000338910 LHFPL6Q9Y693 200 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 ASPMQ8IZT6 3477 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 ZNF318Q5VUA4 2279 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 F10P00742 488 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 ZNF20P17024 532 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 KLHL24Q6TFL4 600 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 CLEC9AQ6UXN8 241 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 ZNF383Q8NA42 475 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 GINS3Q9BRX5 216 aa16.35■□□□□ 0.21
PSPC1-201ENST00000338910 C14orf166Q9Y224 244 aaKnown RBP16.35■□□□□ 0.21
PSPC1-201ENST00000338910 CBR3O75828 277 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 C1QL1O75973 258 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 LY86O95711 162 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 H3F3AP84243 136 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 CLINT1Q14677 625 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 SLC25A47Q6Q0C1 308 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 SUMF1Q8NBK3 374 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 OR2AJ1Q8NGZ0 328 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 OR51E1Q8TCB6 317 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 SLAMF9Q96A28 289 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 WFDC1Q9HC57 220 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 GAR1Q9NY12 217 aaKnown RBP16.34■□□□□ 0.21
PSPC1-201ENST00000338910 S100A2P29034 98 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 RPS10P46783 165 aaKnown RBP16.34■□□□□ 0.21
PSPC1-201ENST00000338910 TMEM164Q5U3C3 297 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 GGNBP1Q5YKI7 109 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 MAFIPQ8WZ33 124 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 MUCL1Q96DR8 90 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 MARS2Q96GW9 593 aaKnown RBP16.34■□□□□ 0.21
PSPC1-201ENST00000338910 SGCZQ96LD1 299 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 PBDC1Q9BVG4 233 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 PARPBPQ9NWS1 579 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 P4HTMQ9NXG6 502 aa16.34■□□□□ 0.21
PSPC1-201ENST00000338910 CCDC187A0A096LP49 1063 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 RER1O15258 196 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 GPR37O15354 613 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 CRTAPO75718 401 aaPredicted RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 P04436 131 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 OR13C7P0DN81 318 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 P2RY1P47900 373 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 HES3Q5TGS1 186 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 YRDCQ86U90 279 aaKnown RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 MRPL24Q96A35 216 aaKnown RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 S100A13Q99584 98 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 PRDM13Q9H4Q3 707 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 DOK5Q9P104 306 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 LOC102725191A0A1B0GVB3 256 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 TNFSF11O14788 317 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 HIST3H3Q16695 136 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 FAM89BQ8N5H3 189 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 GTF3AQ92664 365 aaKnown RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 NTNG2Q96CW9 530 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF385AQ96PM9 386 aaKnown RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 SOX7Q9BT81 388 aa16.33■□□□□ 0.2
PSPC1-201ENST00000338910 URM1Q9BTM9 101 aaKnown RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 STRAPQ9Y3F4 350 aaKnown RBP16.33■□□□□ 0.2
PSPC1-201ENST00000338910 PCSK5Q92824 1860 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 DMXL1Q9Y485 3027 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 BORCS7-ASMTA0A0B4J1R7 106 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 A0A0J9YW62 118 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 A0A1B0GW64 132 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 SLC2A1P11166 492 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 FAM189A2Q15884 450 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 GALNTL5Q7Z4T8 443 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 C14orf144Q96I85 54 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 OR10A2Q9H208 303 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 UFSP2Q9NUQ7 469 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 DOCK10Q96BY6 2186 aa16.32■□□□□ 0.2
PSPC1-201ENST00000338910 E5RGE8 158 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 TLX3O43711 291 aaPredicted RBP16.31■□□□□ 0.2
PSPC1-201ENST00000338910 IFNA21P01568 189 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 CHATP28329 748 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 NDUFA6P56556 154 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 GABREP78334 506 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 SOHLH1Q5JUK2 328 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 HPSE2Q8WWQ2 592 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 SH3BGRL3Q9H299 93 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 NSG2Q9Y328 171 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 PUS1Q9Y606 427 aaKnown RBP eCLIP16.31■□□□□ 0.2
PSPC1-201ENST00000338910 FOXI3A8MTJ6 420 aaPredicted RBP16.31■□□□□ 0.2
PSPC1-201ENST00000338910 SCGB1D2O95969 90 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 PRH1P02810 166 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 SGPP2Q8IWX5 399 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 PIGQQ9BRB3 760 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 MMP24Q9Y5R2 645 aa16.31■□□□□ 0.2
PSPC1-201ENST00000338910 NPIPA2E9PIF3 369 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 NPIPA3F8WFD2 350 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms