RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SOX2P48431 317 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 ZP1P60852 638 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 RPL31P62899 125 aaKnown RBP12.49□□□□□ -0.41
PRKN-201ENST00000338468 DMKNQ6E0U4 476 aaPredicted RBP12.49□□□□□ -0.41
PRKN-201ENST00000338468 Q6YL49 198 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 Q8IYB0 196 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 FAM58AQ8N1B3 248 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 PNKDQ8N490 385 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 ZFP41Q8N8Y5 198 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 BPIFB6Q8NFQ5 453 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 OR5D18Q8NGL1 313 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 OR5D14Q8NGL3 314 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 OR13C5Q8NGS8 318 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
PRKN-201ENST00000338468 SMIM19Q96E16 107 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 VCXQ9H320 206 aa12.49□□□□□ -0.41
PRKN-201ENST00000338468 METTL8Q9H825 291 aaKnown RBP12.49□□□□□ -0.41
PRKN-201ENST00000338468 H0YJX3 145 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 HAND1O96004 215 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 MELTFP08582 738 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 DUSP1P28562 367 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 DLX6P56179 175 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 ERVFRD-1P60508 538 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 RPS11P62280 158 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRKN-201ENST00000338468 ZNF273Q14593 569 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 ZNF146Q15072 292 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 KISS1Q15726 138 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 ASCC1Q8N9N2 400 aaKnown RBP12.48□□□□□ -0.41
PRKN-201ENST00000338468 OR52N4Q8NGI2 321 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 GPR148Q8TDV2 347 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRKN-201ENST00000338468 GHSRQ92847 366 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 PGLYRP3Q96LB9 341 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
PRKN-201ENST00000338468 HMG20AQ9NP66 347 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 NOX4Q9NPH5 578 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 TAS2R4Q9NYW5 299 aa12.48□□□□□ -0.41
PRKN-201ENST00000338468 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 TRBV5-5A0A0J9YX44 114 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 A0A1W2PRD5 423 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 A0A1W2PRF3 423 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 A0A1W2PRM7 423 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 PSPNO60542 156 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 CYB5AP00167 134 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 HCKP08631 526 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 OCM2P0CE71 109 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 OCMP0CE72 109 aaPredicted RBP12.47□□□□□ -0.41
PRKN-201ENST00000338468 CCL3L1P16619 93 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 PRKACAP17612 351 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
PRKN-201ENST00000338468 SAXO1Q8IYX7 474 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 OR8H2Q8N162 312 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 ZDHHC16Q969W1 377 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 ORAI1Q96D31 301 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 SNX22Q96L94 193 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 CHCHD3Q9NX63 227 aaKnown RBP12.47□□□□□ -0.41
PRKN-201ENST00000338468 ZNF281Q9Y2X9 895 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 TGP01266 2768 aa12.47□□□□□ -0.41
PRKN-201ENST00000338468 DSCAML1Q8TD84 2053 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 MEX3AA1L020 520 aaKnown RBP12.46□□□□□ -0.41
PRKN-201ENST00000338468 NPFFO15130 113 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 HKR1P10072 659 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 RAB3AP20336 220 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 UBE2E1P51965 193 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 MED21Q13503 144 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 C6orf141Q5SZD1 244 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 NCR3LG1Q68D85 454 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 LDLRAD3Q86YD5 345 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 STX19Q8N4C7 294 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 NANOGP1Q8N7R0 232 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.41
PRKN-201ENST00000338468 SGCDQ92629 289 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 SLC25A28Q96A46 364 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 AJUBAQ96IF1 538 aa12.46□□□□□ -0.41
PRKN-201ENST00000338468 NKX3-1Q99801 234 aaPredicted RBP12.46□□□□□ -0.41
PRKN-201ENST00000338468 PAK1IP1Q9NWT1 392 aaPredicted RBP12.46□□□□□ -0.41
PRKN-201ENST00000338468 GABRPO00591 440 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 CDK1P06493 297 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 IGFBP3P17936 291 aaPredicted RBP12.45□□□□□ -0.42
PRKN-201ENST00000338468 SAA4P35542 130 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 OR3A1P47881 315 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 BLMHQ13867 455 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 AWAT1Q58HT5 328 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 SPIN3Q5JUX0 258 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 PRR31Q5SQ13 230 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 Q6P435 159 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 C16orf87Q6PH81 154 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 TMEM86BQ8N661 226 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 OR4S1Q8NGB4 309 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 OR5D13Q8NGL4 314 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 C17orf50Q8WW18 174 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 CHIAQ9BZP6 476 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 CHST6Q9GZX3 395 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 TNFRSF19Q9NS68 423 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms