RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 FUNDC2Q9BWH2 189 aa17.06■□□□□ 0.32
MRPL40-201ENST00000333130 CNTD2Q9H8S5 307 aa17.06■□□□□ 0.32
MRPL40-201ENST00000333130 OR14J1Q9UGF5 321 aa17.06■□□□□ 0.32
MRPL40-201ENST00000333130 GSTK1Q9Y2Q3 226 aa17.06■□□□□ 0.32
MRPL40-201ENST00000333130 IGKV1D-17A0A075B6S4 117 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 RFPL4AA6NLU0 287 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 KIAA1324LA8MWY0 1029 aaPredicted RBP17.05■□□□□ 0.32
MRPL40-201ENST00000333130 RFPL4AL1F8VTS6 287 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 SIGLEC5O15389 551 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 ENSAO43768 121 aaKnown RBP17.05■□□□□ 0.32
MRPL40-201ENST00000333130 BCL3P20749 454 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 NPBWR2P48146 333 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 CAPZA1P52907 286 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 CHRFAM7AQ494W8 412 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 GLT8D1Q68CQ7 371 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 ZNF841Q6ZN19 808 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 FAM58AQ8N1B3 248 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 ZNF561Q8N587 486 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 Q8NFD4 153 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 GAFA1Q96PS6 74 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 CENPOQ9BU64 300 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 MRI1Q9BV20 369 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 BEX2Q9BXY8 128 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 ELL3Q9HB65 397 aaPredicted RBP17.05■□□□□ 0.32
MRPL40-201ENST00000333130 IL36GQ9NZH8 169 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 SCOCQ9UIL1 159 aa17.05■□□□□ 0.32
MRPL40-201ENST00000333130 FN1P02751 2386 aaKnown RBP17.04■□□□□ 0.32
MRPL40-201ENST00000333130 AIREO43918 545 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 PRKACAP17612 351 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 CFPP27918 469 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 PRDX2P32119 198 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 RPL5P46777 297 aaKnown RBP17.04■□□□□ 0.32
MRPL40-201ENST00000333130 MTNR1BP49286 362 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 RSU1Q15404 277 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 SPIN3Q5JUX0 258 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 C1orf100Q5SVJ3 147 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 FAM120AOSQ5T036 256 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 ELP2Q6IA86 826 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 TMEM185AQ8NFB2 350 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 OR4D6Q8NGJ1 314 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 RAB40AQ8WXH6 277 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 SDSLQ96GA7 329 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 KCTD7Q96MP8 289 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 PCDHB16Q9NRJ7 776 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 RBFOX1Q9NWB1 397 aaKnown RBP17.04■□□□□ 0.32
MRPL40-201ENST00000333130 SLC25A10Q9UBX3 287 aaPredicted RBP17.04■□□□□ 0.32
MRPL40-201ENST00000333130 ZNF222Q9UK12 451 aa17.04■□□□□ 0.32
MRPL40-201ENST00000333130 IGHV2-70DA0A0C4DH43 119 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 LOC100506127A0A0U1RQW1 187 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 LIPFP07098 398 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 SFTPBP07988 381 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 SLC16A12Q6ZSM3 486 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 C1orf147Q96MC9 270 aaPredicted RBP17.03■□□□□ 0.32
MRPL40-201ENST00000333130 NUDT16L1Q9BRJ7 211 aaKnown RBP17.03■□□□□ 0.32
MRPL40-201ENST00000333130 RNF167Q9H6Y7 350 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 C7orf69Q9H7B7 122 aa17.03■□□□□ 0.32
MRPL40-201ENST00000333130 AK6Q9Y3D8 172 aaKnown RBP17.03■□□□□ 0.32
MRPL40-201ENST00000333130 SETD2Q9BYW2 2564 aaPredicted RBP17.03■□□□□ 0.32
MRPL40-201ENST00000333130 PDCD5O14737 125 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 SLC22A1O15245 554 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 CHRM2P08172 466 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 NDUFB7P17568 137 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 SRP14P37108 136 aaKnown RBP17.02■□□□□ 0.32
MRPL40-201ENST00000333130 PSMD7P51665 324 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 CAV3P56539 151 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 SCGB2A2Q13296 93 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 GPR141Q7Z602 305 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 TPRA1Q86W33 373 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 ANKRD13BQ86YJ7 626 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 TBC1D15Q8TC07 691 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 H1FXQ92522 213 aaKnown RBP17.02■□□□□ 0.32
MRPL40-201ENST00000333130 METTL9Q9H1A3 318 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 HMG20AQ9NP66 347 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 MRPS28Q9Y2Q9 187 aaKnown RBP17.02■□□□□ 0.32
MRPL40-201ENST00000333130 INSIG2Q9Y5U4 225 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 NIPBLQ6KC79 2804 aaeCLIP17.02■□□□□ 0.32
MRPL40-201ENST00000333130 NAV3Q8IVL0 2385 aa17.02■□□□□ 0.32
MRPL40-201ENST00000333130 SLC17A2O00624 439 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 ZNF780AO75290 641 aaPredicted RBP17.02■□□□□ 0.31
MRPL40-201ENST00000333130 CRLF1O75462 422 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 GABARAPO95166 117 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 CDRT1O95170 752 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 CSTBP04080 98 aaKnown RBP17.02■□□□□ 0.31
MRPL40-201ENST00000333130 AMY2BP19961 511 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 ZNF146Q15072 292 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 BTN2A1Q7KYR7 527 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 NR2C2APQ86WQ0 139 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 ASCC1Q8N9N2 400 aaKnown RBP17.02■□□□□ 0.31
MRPL40-201ENST00000333130 OR6M1Q8NGM8 313 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 FAM234AQ9H0X4 552 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 SEBOXQ9HB31 216 aaPredicted RBP17.02■□□□□ 0.31
MRPL40-201ENST00000333130 MMP26Q9NRE1 261 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 GHRLQ9UBU3 117 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 V9GY05 133 aa17.02■□□□□ 0.31
MRPL40-201ENST00000333130 A0A1B0GW55 424 aa17.01■□□□□ 0.31
MRPL40-201ENST00000333130 SH2D1BO14796 132 aa17.01■□□□□ 0.31
MRPL40-201ENST00000333130 HAND1O96004 215 aa17.01■□□□□ 0.31
MRPL40-201ENST00000333130 DUX4L2P0CJ85 424 aa17.01■□□□□ 0.31
MRPL40-201ENST00000333130 DUX4L3P0CJ86 424 aa17.01■□□□□ 0.31
MRPL40-201ENST00000333130 DUX4L4P0CJ87 422 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms