RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SDC2P34741 201 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 TGFBR1P36897 503 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 PITPNBP48739 271 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 GZMKP49863 264 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 PSMD7P51665 324 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 IL13RA1P78552 427 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 ESCO2Q56NI9 601 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 FIP1L1Q6UN15 594 aaKnown RBP13.34□□□□□ -0.27
LRRC28-202ENST00000331450 MSI2Q96DH6 328 aaKnown RBP13.34□□□□□ -0.27
LRRC28-202ENST00000331450 S100A13Q99584 98 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 NAA50Q9GZZ1 169 aaKnown RBP13.34□□□□□ -0.27
LRRC28-202ENST00000331450 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-202ENST00000331450 GHRLQ9UBU3 117 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 POLR3KQ9Y2Y1 108 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-202ENST00000331450 DSCAML1Q8TD84 2053 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 HIVEP1P15822 2718 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 ZANQ9Y493 2812 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.287e-8■■■□□ 16.4
LRRC28-202ENST00000331450 IFITM5A6NNB3 132 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 DVL1O14640 695 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 ZNF737O75373 536 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 HTR3BO95264 441 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 HAND1O96004 215 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 UBBP0CG47 229 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 SERPINA2P20848 420 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 GABRA2P47869 451 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 NPY4RP50391 375 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 RBM11P57052 281 aaKnown RBP13.33□□□□□ -0.28
LRRC28-202ENST00000331450 GPR176Q14439 515 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 IL13RA2Q14627 380 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 CTF1Q16619 201 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 SLC22A6Q4U2R8 563 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 GPR107Q5VW38 600 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 WDR25Q64LD2 544 aaPredicted RBP13.33□□□□□ -0.28
LRRC28-202ENST00000331450 OSR2Q8N2R0 312 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 FGFRL1Q8N441 504 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 ZNF561Q8N587 486 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 TMEM104Q8NE00 496 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 MED30Q96HR3 178 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 SSBP3Q9BWW4 388 aaPredicted RBP13.33□□□□□ -0.28
LRRC28-202ENST00000331450 PLGRKTQ9HBL7 147 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 OR14J1Q9UGF5 321 aa13.33□□□□□ -0.28
LRRC28-202ENST00000331450 SMIM30A4D0T7 59 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 B4DSR2 109 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 BPNT1O95861 308 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 CSTBP04080 98 aaKnown RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 MSMBP08118 114 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 CLEC2LP0C7M8 214 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 VSIG8P0DPA2 414 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 ZNF16P17020 682 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 ZFP36P26651 326 aaKnown RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 DUSP1P28562 367 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 SNU13P55769 128 aaKnown RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 NCS1P62166 190 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 LSM3P62310 102 aaKnown RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 GNB2P62879 340 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 QRFPP83859 136 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 PAX2Q02962 417 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 RAB11BQ15907 218 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 PIGYQ3MUY2 71 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 Q6P435 159 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 LINC01356Q8N9X3 169 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 ZNRF1Q8ND25 227 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 DACT3Q96B18 629 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 MRPS24Q96EL2 167 aaKnown RBP13.32□□□□□ -0.28
LRRC28-202ENST00000331450 KCNK15Q9H427 330 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 PCDHB16Q9NRJ7 776 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 CLN8Q9UBY8 286 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 MED13LQ71F56 2210 aa13.32□□□□□ -0.28
LRRC28-202ENST00000331450 NOTOA8MTQ0 251 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 TMEM14DPA8MWL7 114 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 AIPO00170 330 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-202ENST00000331450 CD5LO43866 347 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 FOXH1O75593 365 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 OR2H2O95918 312 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 CHRM2P08172 466 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 GTF2F2P13984 249 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 MGMTP16455 207 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 LMO1P25800 156 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 CAPZA1P52907 286 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 CAV3P56539 151 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 CLDN12P56749 244 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 COL10A1Q03692 680 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 MXD1Q05195 221 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 UNC119Q13432 240 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 P2RY14Q15391 338 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 HES5Q5TA89 166 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 C17orf107Q6ZR85 190 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 Q96M66 194 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 SMR3AQ99954 134 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 FAM234AQ9H0X4 552 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 CST11Q9H112 138 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 FBLN5Q9UBX5 448 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 STEAP1Q9UHE8 339 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 ST3GAL6Q9Y274 331 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 ARHGAP32A7KAX9 2087 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 MALRD1Q5VYJ5 2156 aa13.31□□□□□ -0.28
LRRC28-202ENST00000331450 PPIAL4CA0A0B4J2A2 164 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms