RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 ISG15P05161 165 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 CTSDP07339 412 aaPredicted RBP12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 KITLGP21583 273 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 DEFB109BQ30KR1 87 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 MRPS24Q96EL2 167 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 TGIF2Q9GZN2 237 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 HS3ST3B1Q9Y662 390 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 PRR32B1ATL7 298 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 ADAM20O43506 726 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 MAGEA5P43359 124 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 HOXA1P49639 335 aaPredicted RBP12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 UQCC3Q6UW78 93 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 TMPRSS7Q7RTY8 843 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 LHX4Q969G2 390 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 G6PC2Q9NQR9 355 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 OR2C1O95371 312 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 CRYAAP02489 173 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 SFTA3P0C7M3 94 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 CALCRP30988 508 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 DHODHQ02127 395 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 ZNF718Q3SXZ3 478 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 TEX30Q5JUR7 227 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 OR11L1Q8NGX0 322 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 SOSTQ9BQB4 213 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 GPR160Q9UJ42 338 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 IGKV1D-43A0A0B4J1Z2 117 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 C3orf85A0A1B0GTC6 90 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 LYZL6O75951 148 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 CST2P09228 141 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 MLF1P58340 268 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 RNPS1Q15287 305 aaKnown RBP12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 GUK1Q16774 197 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 ZNF766Q5HY98 468 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 OR2H1Q9GZK4 316 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 ARV1Q9H2C2 271 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 LIN7CQ9NUP9 197 aaKnown RBP12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 FAM206AQ9NX38 181 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 RASL12Q9NYN1 266 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 PSENENQ9NZ42 101 aa12.08□□□□□ -0.48
DNMT3B-202ENST00000328111 RAMP1O60894 148 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 NDUFA6P56556 154 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 POLR2GP62487 172 aaKnown RBP eCLIP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SURF2Q15527 256 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SAP25Q8TEE9 199 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 CLDN23Q96B33 292 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 RSPO3Q9BXY4 272 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 BDP1A6H8Y1 2624 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 C17orf112F2Z3M2 114 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 J3QRE1 110 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 HPP00738 406 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 IL2RAP01589 272 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SELEP16581 610 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 PLGLAQ15195 96 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 FAM27BQ5VT28 67 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SLC25A47Q6Q0C1 308 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 NMES1Q9C002 83 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SERTAD4Q9NUC0 356 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 TNFSF18Q9UNG2 199 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 TIMM8BQ9Y5J9 83 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 LOC101059948A0A1B0GTJ6 334 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 PSMB3P49720 205 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 RAB5CP51148 216 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 MESP1Q9BRJ9 268 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SHARPINQ9H0F6 387 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 STARD6P59095 220 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 HOGA1Q86XE5 327 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 LRRC75AQ8NAA5 344 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 VOPP1Q96AW1 172 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 ADAT1Q9BUB4 502 aaKnown RBP12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 SLC2A9Q9NRM0 540 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 C19orf12Q9NSK7 152 aa12.07□□□□□ -0.48
DNMT3B-202ENST00000328111 ANAPC1Q9H1A4 1944 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 IGLV3-19P01714 112 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 RPS16P62249 146 aaKnown RBP12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 EIF3IQ13347 325 aaKnown RBP12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 ZNF660Q6AZW8 331 aaPredicted RBP12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 HPSE2Q8WWQ2 592 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 CHRNA10Q9GZZ6 450 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 OPA3Q9H6K4 179 aa12.06□□□□□ -0.48
DNMT3B-202ENST00000328111 PROCRQ9UNN8 238 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms