RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CCDC163A0A0D9SF12 145 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 CD99P14209 185 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 PSMB5P28074 263 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 GJA5P36382 358 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 HLA-DRB3P79483 266 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 ADAMTS17Q8TE56 1095 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 ASB10Q8WXI3 467 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 PLA2G12AQ9BZM1 189 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 SLC52A3Q9NQ40 469 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 NPTNQ9Y639 398 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OOEPA6NGQ2 149 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 CD74P04233 296 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 RPEL1Q2QD12 228 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 SLC36A1Q7Z2H8 476 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR52L2PQ8NGH6 319 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 CARHSP1Q9Y2V2 147 aaKnown RBP7.85□□□□□ -1.15
COL6A5-202ENST00000312481 ARL16Q0P5N6 197 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 BHLHE23Q8NDY6 225 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 SLC24A4Q8NFF2 622 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR4B1Q8NGF8 309 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR13G1Q8NGZ3 307 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR2V1Q8NHB1 315 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR51M1Q9H341 326 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 TNFRSF12AQ9NP84 129 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 SOX21Q9Y651 276 aaPredicted RBP7.85□□□□□ -1.15
COL6A5-202ENST00000312481 LINC01553A4QN01 128 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 MFSD2BA6NFX1 497 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 GALR1P47211 349 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 NDUFA6P56556 154 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 KCNAB1Q14722 419 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF66Q6ZN08 573 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 OR51H1Q8NH63 302 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 MARCH1Q8TCQ1 289 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 SEC22AQ96IW7 307 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 ISG20L2Q9H9L3 353 aaKnown RBP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 LANCL1O43813 399 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 PPP1R17O96001 155 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 TEX29Q8N6K0 151 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 FBXW5Q969U6 566 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 PRNDQ9UKY0 176 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 GZMHP20718 246 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 CFPP27918 469 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 OTX2P32243 289 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 RPS11P62280 158 aaKnown RBP eCLIP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 PPIAP62937 165 aaKnown RBP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 PPP1R1AQ13522 171 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM196Q5HYL7 178 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 TGIF2Q9GZN2 237 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 DMRT1Q9Y5R6 373 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 MED13Q9UHV7 2174 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM238LA0A1B0GVL6 79 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 A6NJY4 79 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 RHBDD2Q6NTF9 364 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 UBE2FQ969M7 185 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 IL21Q9HBE4 155 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 TUSC2O75896 110 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 OR1L1Q8NH94 360 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 SCARF2Q96GP6 870 aaPredicted RBP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 PRAMEF5Q5TYX0 476 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 PRAMEF6Q5VXH4 476 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 DHRS7BQ6IAN0 325 aaPredicted RBP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 FAM180BQ6P0A1 224 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 LTB4R2Q9NPC1 389 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 KLK11Q9UBX7 282 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 CA14Q9ULX7 337 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 MTCH2Q9Y6C9 303 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 COL4A1P02462 1669 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 A8MU76 341 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 ABOP16442 354 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF705AQ6ZN79 300 aaPredicted RBP7.84□□□□□ -1.15
COL6A5-202ENST00000312481 OR5A2Q8NGI9 324 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 SPANXDQ9BXN6 97 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 FGF22Q9HCT0 170 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM242Q9NWH2 141 aa7.84□□□□□ -1.15
COL6A5-202ENST00000312481 CBY3A6NI87 242 aa7.84□□□□□ -1.16
COL6A5-202ENST00000312481 CLDN12P56749 244 aa7.84□□□□□ -1.16
COL6A5-202ENST00000312481 MYBPHQ13203 477 aa7.84□□□□□ -1.16
COL6A5-202ENST00000312481 WDR38Q5JTN6 314 aa7.84□□□□□ -1.16
COL6A5-202ENST00000312481 LRRC3CA6NJW4 275 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ACRP10323 421 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 DAOP14920 347 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 Q3ZCU0 254 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 OR5M10Q6IEU7 315 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 OR5M1Q8NGP8 315 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 FAM227AF5H4B4 570 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF79Q15937 498 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 SERTAD4Q9NUC0 356 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 TECRQ9NZ01 308 aaKnown RBP7.83□□□□□ -1.16
COL6A5-202ENST00000312481 MEIS3P1A6NDR6 274 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF98A6NK75 572 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 HSBP1O75506 76 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 NPBWR1P48145 328 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 PGGT1BP53609 377 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 UBE2V2Q15819 145 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 TOMM20LQ6UXN7 152 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 TGIF2LYQ8IUE0 185 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 C17orf78Q8N4C9 275 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ERGIC1Q969X5 290 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms