RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PLEKHA2Q9HB19 425 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 GPR173Q9NS66 373 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 FLRT3Q9NZU0 649 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 HSF4Q9ULV5 492 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 H3BMH7 237 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 IFI6P09912 130 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 GLRA1P23415 457 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 CD226Q15762 336 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 ZNF141Q15928 474 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 TAF9Q16594 264 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 RSPO4Q2I0M5 234 aaPredicted RBP9.59□□□□□ -0.87
LSM3-201ENST00000306024 FBXW12Q6X9E4 464 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 ZNF66Q6ZN08 573 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 C1QL4Q86Z23 238 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 OR5T1Q8NG75 326 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 OR51A2Q8NGJ7 313 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 NEU1Q99519 415 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 DNAJB12Q9NXW2 375 aaKnown RBP9.59□□□□□ -0.87
LSM3-201ENST00000306024 SLC2A8Q9NY64 477 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 LAMP3Q9UQV4 416 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 LIPGQ9Y5X9 500 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 A0A0B4J2E0 115 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 LOC101059948A0A1B0GTJ6 334 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 A0A1B0GX12 115 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 CBY3A6NI87 242 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 FTCDNL1E5RQL4 147 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 SLC16A7O60669 478 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 PPP1CCP36873 323 aaKnown RBP9.59□□□□□ -0.87
LSM3-201ENST00000306024 PCOLCEQ15113 449 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 DEFB109BQ30KR1 87 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 GPR157Q5UAW9 335 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 NCR3LG1Q68D85 454 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 APCDD1LQ8NCL9 501 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 TMEM37Q8WXS4 190 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 FRZBQ92765 325 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 ADIPOR1Q96A54 375 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 RARRES2Q99969 163 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 URM1Q9BTM9 101 aaKnown RBP9.59□□□□□ -0.87
LSM3-201ENST00000306024 PRRG4Q9BZD6 226 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 B4GALT7Q9UBV7 327 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 B3GALT5Q9Y2C3 310 aa9.59□□□□□ -0.87
LSM3-201ENST00000306024 IGHV1-45A0A0A0MS14 117 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 TRBV5-5A0A0J9YX44 114 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 CDRT15L2A8MXV6 281 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 PPP5D1E7EU14 171 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 CLDN34H7C241 214 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ZIC2O95409 532 aaPredicted RBP9.58□□□□□ -0.88
LSM3-201ENST00000306024 UMODP07911 640 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 CYC1P08574 325 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 SLC2A1P11166 492 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 CD82P27701 267 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 GPR137CQ8N3F9 429 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 SLC7A11Q9UPY5 501 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ZFP92A6NM28 416 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ALG1L2C9J202 215 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 KLF7O75840 302 aaPredicted RBP9.58□□□□□ -0.88
LSM3-201ENST00000306024 H2BFMP0C1H6 154 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 HLA-GP17693 338 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 SPINK2P20155 84 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 TBPP20226 339 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 FXYD4P59646 89 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 GLO1Q04760 184 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 MFGE8Q08431 387 aaPredicted RBP9.58□□□□□ -0.88
LSM3-201ENST00000306024 GGTLC2Q14390 218 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 SGCBQ16585 318 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.58□□□□□ -0.88
LSM3-201ENST00000306024 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 GPR119Q8TDV5 335 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 KCNE4Q8WWG9 221 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 FGGYQ96C11 551 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 NTNG2Q96CW9 530 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 SPACA5Q96QH8 159 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 CLDN16Q9Y5I7 305 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 TMEM269A0A1B0GVZ9 245 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 P2RY10O00398 339 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 UPK3AO75631 287 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 MELTFP08582 738 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 HKR1P10072 659 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 COX6A1P12074 109 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 APLNRP35414 380 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 GUCA1AP43080 201 aaPredicted RBP9.58□□□□□ -0.88
LSM3-201ENST00000306024 POLR2HP52434 150 aaKnown RBP9.58□□□□□ -0.88
LSM3-201ENST00000306024 FAM3AP98173 230 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ZNF117Q03924 483 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 ADIRFQ15847 76 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 SGCZQ96LD1 299 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 HDGFL3Q9Y3E1 203 aa9.58□□□□□ -0.88
LSM3-201ENST00000306024 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 E5RGE8 158 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 IL2RAP01589 272 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 CXCL1P09341 107 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 GDF1P27539 372 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 CD200P41217 278 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 CDCP2Q5VXM1 449 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 HIST1H2BLQ99880 126 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 BANF2Q9H503 90 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms