RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
HIPK3-201ENST00000303296 SDF2Q99470 211 aa12.73□□□□□ -0.37
HIPK3-201ENST00000303296 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
HIPK3-201ENST00000303296 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
HIPK3-201ENST00000303296 SYT8Q8NBV8 401 aa12.73□□□□□ -0.37
HIPK3-201ENST00000303296 KLK15Q9H2R5 256 aa12.73□□□□□ -0.37
HIPK3-201ENST00000303296 PLPP1O14494 284 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 SYT14P1Q58G82 188 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 PET117Q6UWS5 81 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 SLCO4C1Q6ZQN7 724 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 NANOGP1Q8N7R0 232 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 TMEM204Q9BSN7 226 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 LIPAP38571 399 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 BTG1P62324 171 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 ABHD17CQ6PCB6 329 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 DEFB124Q8NES8 71 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 PERPQ96FX8 193 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 LYRM4Q9HD34 91 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
HIPK3-201ENST00000303296 EXOGQ9Y2C4 368 aaKnown RBP12.72□□□□□ -0.37
HIPK3-201ENST00000303296 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
HIPK3-201ENST00000303296 SPTBP11277 2137 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
HIPK3-201ENST00000303296 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 NUDT8Q8WV74 236 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 KLK11Q9UBX7 282 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 DSCR3O14972 297 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 LGALS3P17931 250 aaKnown RBP12.72□□□□□ -0.37
HIPK3-201ENST00000303296 SDHBP21912 280 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 AANATQ16613 207 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 ADAMTSL4Q6UY14 1074 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 XRN1Q8IZH2 1706 aaKnown RBP12.72□□□□□ -0.37
HIPK3-201ENST00000303296 BCL2L11O43521 198 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 FECHP22830 423 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 SPEM2Q0P670 501 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 KIR3DX1Q9H7L2 352 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 M0QZQ0 153 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 CD3EP07766 207 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 OR4B1Q8NGF8 309 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 OR13G1Q8NGZ3 307 aa12.72□□□□□ -0.37
HIPK3-201ENST00000303296 IGKV3-20P01619 116 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.37
HIPK3-201ENST00000303296 ANKRD55Q3KP44 614 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 NOXO1Q8NFA2 376 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 OR4X1Q8NH49 305 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 OR1F12Q8NHA8 337 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 RTTNQ86VV8 2226 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 OR2W5A6NFC9 320 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 SMPD2O60906 423 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 SLC6A1P30531 599 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 TCTN3Q6NUS6 607 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 AURKAIP1Q9NWT8 199 aaPredicted RBP12.71□□□□□ -0.37
HIPK3-201ENST00000303296 HSF4Q9ULV5 492 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 AGFG2O95081 481 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 GNRHR2Q96P88 292 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 MMP26Q9NRE1 261 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 PF4V1P10720 104 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 CD22P20273 847 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 NCMAPQ5T1S8 102 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 SIGLEC11Q96RL6 698 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 ZFP30Q9Y2G7 519 aa12.71□□□□□ -0.37
HIPK3-201ENST00000303296 MRPS16Q9Y3D3 137 aaKnown RBP12.71□□□□□ -0.37
HIPK3-201ENST00000303296 CLRN3Q8NCR9 226 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.38
HIPK3-201ENST00000303296 C3orf85A0A1B0GTC6 90 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 DDOSTP39656 456 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 IER3P46695 156 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 AESQ08117 197 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 CGB2Q6NT52 195 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 OR5AU1Q8NGC0 362 aa12.71□□□□□ -0.38
HIPK3-201ENST00000303296 HPXP02790 462 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 HTN3P15516 51 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 NXPH1P58417 271 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 LAT2Q9GZY6 243 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 DOCK9Q9BZ29 2069 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 MRPL58Q14197 206 aaKnown RBP12.7□□□□□ -0.38
HIPK3-201ENST00000303296 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 TMED3Q9Y3Q3 217 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 ALG1L2C9J202 215 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 FZD9O00144 591 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 FAM157CP0CG43 387 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 TMIGD3P0DMS9 266 aaPredicted RBP12.7□□□□□ -0.38
HIPK3-201ENST00000303296 MAS1LP35410 378 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 DSCR4P56555 118 aaPredicted RBP12.7□□□□□ -0.38
HIPK3-201ENST00000303296 SLC35B1P78383 322 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 FOXB1Q99853 325 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 GABRA1P14867 456 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 GEMIN7Q9H840 131 aaKnown RBP12.7□□□□□ -0.38
HIPK3-201ENST00000303296 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 PITPNC1Q9UKF7 332 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 TAPBPO15533 448 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 TFAP2AP05549 437 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 ZNF418Q8TF45 676 aaPredicted RBP12.7□□□□□ -0.38
HIPK3-201ENST00000303296 ATOH8Q96SQ7 321 aa12.7□□□□□ -0.38
HIPK3-201ENST00000303296 SOSTQ9BQB4 213 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms