RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PIGCQ92535 297 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 SPSB1Q96BD6 273 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 SGCZQ96LD1 299 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
HIF3A-204ENST00000300862 WNT5BQ9H1J7 359 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 C1orf123Q9NWV4 160 aa11.19□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF407Q9C0G0 2248 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 C9JQL5 133 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 FCGR3AP08637 254 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 CST2P09228 141 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 HKR1P10072 659 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 GDF1P27539 372 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 ID4P47928 161 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 CAV2P51636 162 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 SRYQ05066 204 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 ACER2Q5QJU3 275 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 GGNBP1Q5YKI7 109 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 SPINK14Q6IE38 97 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 TCEAL6Q6IPX3 200 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 TIPARPQ7Z3E1 657 aaKnown RBP11.18□□□□□ -0.62
HIF3A-204ENST00000300862 C5orf24Q7Z6I8 188 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 FNDC9Q8TBE3 224 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 ADAMTS17Q8TE56 1095 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 TCEAL3Q969E4 200 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 C10orf35Q96D05 121 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 SF3B5Q9BWJ5 86 aaKnown RBP11.18□□□□□ -0.62
HIF3A-204ENST00000300862 GSN-AS1Q9NRJ2 163 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 TCFL5Q9UL49 500 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 OR6C6A6NF89 314 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 LPAR6P43657 344 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 F2RL1P55085 397 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 EIF3IQ13347 325 aaKnown RBP11.18□□□□□ -0.62
HIF3A-204ENST00000300862 SURF2Q15527 256 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-204ENST00000300862 WDR5BQ86VZ2 330 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 CNTNAP3Q9BZ76 1288 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 OR2H1Q9GZK4 316 aa11.18□□□□□ -0.62
HIF3A-204ENST00000300862 TNRC6BQ9UPQ9 1833 aaKnown RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CCDC163A0A0D9SF12 145 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CRYM-AS1A6NIL9 109 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CTSDP07339 412 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 SFTPCP11686 197 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TDGF1P13385 188 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CCL2P13500 99 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 SPINK2P20155 84 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CCNOP22674 350 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CHATP28329 748 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 NOVA1P51513 510 aaKnown RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 RAB5BP61020 215 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 FAM3AP98173 230 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TRA2AQ13595 282 aaKnown RBP eCLIP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 ARL6IP1Q15041 203 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 SLC22A25Q6T423 547 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 OR2V1Q8NHB1 315 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CPT1CQ8TCG5 803 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TAF9BQ9HBM6 251 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 P4HTMQ9NXG6 502 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 ST3GAL6Q9Y274 331 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 FAM157AC9JC47 383 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 DIRAS3O95661 229 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 PET100P0DJ07 73 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 RPL12P30050 165 aaKnown RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 FCGR2CP31995 323 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 DUSP3P51452 185 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CNN3Q15417 329 aaKnown RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 Q6ZPA2 131 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CALHM1Q8IU99 346 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 OR11L1Q8NGX0 322 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-204ENST00000300862 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF251Q9BRH9 671 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 PLA2G2EQ9NZK7 142 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 MEMO1Q9Y316 297 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TIMM10BQ9Y5J6 103 aa11.17□□□□□ -0.62
HIF3A-204ENST00000300862 TMEM265A0A087WTH1 108 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 A0A096LPE4 126 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 A0A1W2PPZ6 126 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 RNASEK-C17orf49H0YIS7 233 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 K7EPK0 472 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 UBE2CO00762 179 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 RRP8O43159 456 aaKnown RBP11.16□□□□□ -0.62
HIF3A-204ENST00000300862 MED6O75586 246 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF806P0C7X5 589 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 EDN3P14138 238 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 PTAFRP25105 342 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 HOXA6P31267 233 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 AKR1C3P42330 323 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 LYZL2Q7Z4W2 148 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 OSR2Q8N2R0 312 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 FAM71E2Q8N5Q1 922 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms