RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 DEFB109BQ30KR1 87 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 ARHGAP5-AS1Q96IT6 56 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 MS4A4AQ96JQ5 239 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 MRGPRX4Q96LA9 322 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 LOXL2Q9Y4K0 774 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 BCORQ6W2J9 1755 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 HRASP01112 189 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 MYOGP15173 224 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 RAB9AP51151 201 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 ST3GAL2Q16842 350 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 SLC35E3Q7Z769 313 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 KLF13Q9Y2Y9 288 aaPredicted RBP4.97□□□□□ -1.61
CPSF2-201ENST00000298875 C3orf85A0A1B0GTC6 90 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 NDUFB3O43676 98 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 CAMPP49913 170 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 DOLPP1Q86YN1 238 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 KISS1RQ969F8 398 aaPredicted RBP4.97□□□□□ -1.61
CPSF2-201ENST00000298875 FGF22Q9HCT0 170 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 FGF20Q9NP95 211 aaPredicted RBP4.97□□□□□ -1.61
CPSF2-201ENST00000298875 PIPOXQ9P0Z9 390 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 SOX21Q9Y651 276 aaPredicted RBP4.97□□□□□ -1.61
CPSF2-201ENST00000298875 HLA-DQA1P01909 254 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 SLC6A1P30531 599 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 UCNP55089 124 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 SMUG1Q53HV7 270 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 KHDC3LQ587J8 217 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 MORN4Q8NDC4 146 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 OR8D4Q8NGM9 314 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 SIGLEC11Q96RL6 698 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 DDA1Q9BW61 102 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 SERPINE3A8MV23 424 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 CRYAAP02489 173 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 KLKB1P03952 638 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 HOXA6P31267 233 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 THBS4P35443 961 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 GAMTQ14353 236 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 OR5R1Q8NH85 324 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
CPSF2-201ENST00000298875 APOBEC3DQ96AK3 386 aaPredicted RBP4.97□□□□□ -1.61
CPSF2-201ENST00000298875 ELOVL1Q9BW60 279 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 ZNF385DQ9H6B1 395 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 PARP11Q9NR21 331 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 FZR1Q9UM11 496 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 DOCK1Q14185 1865 aa4.97□□□□□ -1.61
CPSF2-201ENST00000298875 GSTZ1O43708 216 aaPredicted RBP4.96□□□□□ -1.61
CPSF2-201ENST00000298875 TTRP02766 147 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 FAM87AP0C7U9 286 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 PCMT1P22061 227 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 CST9Q5W186 159 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 FBXO17Q96EF6 278 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 ASXL3Q9C0F0 2248 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 DNASE2O00115 360 aaPredicted RBP4.96□□□□□ -1.61
CPSF2-201ENST00000298875 WNT1P04628 370 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 ZGLP1P0C6A0 271 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 UBE2V2Q15819 145 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 OR5A2Q8NGI9 324 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 HELTA6NFD8 242 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 RBFOX3A6NFN3 312 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 GAGE10A6NGK3 116 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 LMX1BO60663 402 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 OR3A4PP47883 348 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 LYZP61626 148 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 C6orf201Q7Z4U5 140 aa4.96□□□□□ -1.61
CPSF2-201ENST00000298875 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 SLC17A2O00624 439 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 IGHA1P01876 353 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 IGHA2P01877 340 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 ORM2P19652 201 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 CCR2P41597 374 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 PPICP45877 212 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 DYNLT3P51808 116 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 ARF6P62330 175 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 GSG1Q2KHT4 349 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 ZNF600Q6ZNG1 722 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 OR2V1Q8NHB1 315 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 ASB1Q9Y576 335 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 ANKRD34CP0C6C1 535 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 SCGB1D4Q6XE38 83 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 RNF165Q6ZSG1 346 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 TMEM174Q8WUU8 243 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 TMEM56Q96MV1 263 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 HSD17B10Q99714 261 aaKnown RBP4.96□□□□□ -1.62
CPSF2-201ENST00000298875 MARVELD1Q9BSK0 173 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 C9orf170A2RU37 121 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 SHISA8B8ZZ34 492 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 ACAA1P09110 424 aaPredicted RBP4.96□□□□□ -1.62
CPSF2-201ENST00000298875 SLC6A12P48065 614 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 MICBQ29980 383 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 FNDC7Q5VTL7 733 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 TMEM251Q8N6I4 163 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 FAM169BQ8N8A8 192 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 OR5A1Q8NGJ0 315 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 OR1L3Q8NH93 324 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 KTI12Q96EK9 354 aaPredicted RBP4.96□□□□□ -1.62
CPSF2-201ENST00000298875 MRPL37Q9BZE1 423 aaKnown RBP4.96□□□□□ -1.62
CPSF2-201ENST00000298875 MGPP08493 103 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 CA6P23280 308 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 HLA-DRB3P79483 266 aa4.96□□□□□ -1.62
CPSF2-201ENST00000298875 LSM11P83369 360 aaKnown RBP eCLIP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms