RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 LHFPL2Q6ZUX7 228 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF100Q8IYN0 542 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 LRRC18Q8N456 261 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 UBAC2Q8NBM4 344 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 BHLHE23Q8NDY6 225 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 LYPD6BQ8NI32 183 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 FBXO17Q96EF6 278 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 NRIP2Q9BQI9 281 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 PROK2Q9HC23 129 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 OR2S2Q9NQN1 319 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 IL36GQ9NZH8 169 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 DKKL1Q9UK85 242 aa11.21□□□□□ -0.61
C9orf3-201ENST00000277198 GCN1Q92616 2671 aaKnown RBP11.21□□□□□ -0.61
C9orf3-201ENST00000277198 K7EM74 188 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 MASP2O00187 686 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 SGCEO43556 437 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 SYNGR3O43761 229 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 CD5P06127 495 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 COX6A1P12074 109 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 PMELP40967 661 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 AKR1C2P52895 323 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 AKR1C1Q04828 323 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 CHAF1BQ13112 559 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 RSU1Q15404 277 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 HMGN3Q15651 99 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 KRTAP27-1Q3LI81 207 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM42Q69YG0 159 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 RPL7L1Q6DKI1 246 aaKnown RBP11.21□□□□□ -0.62
C9orf3-201ENST00000277198 BTNL8Q6UX41 500 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 COMMD1Q8N668 190 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 PIGTQ969N2 578 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 SGCZQ96LD1 299 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 GNRHR2Q96P88 292 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 TECTBQ96PL2 329 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 PRR13Q9NZ81 148 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 MLXQ9UH92 298 aa11.21□□□□□ -0.62
C9orf3-201ENST00000277198 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 C21orf140B9A014 251 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 C9J4A7 227 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 FCGR3AP08637 254 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 CCL3P10147 92 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 GABRR1P24046 479 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 RBP2P50120 134 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 SRSF3P84103 164 aaKnown RBP11.2□□□□□ -0.62
C9orf3-201ENST00000277198 SNAI3Q3KNW1 292 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 SKA3Q8IX90 412 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 CPT1CQ8TCG5 803 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 MAFIPQ8WZ33 124 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-201ENST00000277198 UCN2Q96RP3 112 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 SUCNR1Q9BXA5 334 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 HRH4Q9H3N8 390 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 ACKR4Q9NPB9 350 aa11.2□□□□□ -0.62
C9orf3-201ENST00000277198 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
C9orf3-201ENST00000277198 E5RGE8 158 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 FBXO24O75426 580 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 MED6O75586 246 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 UMODP07911 640 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 PAX6P26367 422 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 DVL1P1P54792 670 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 UCP3P55916 312 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 GPR157Q5UAW9 335 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 GGNBP1Q5YKI7 109 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 RPS19BP1Q86WX3 136 aaKnown RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 OR1F12Q8NHA8 337 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 REEP6Q96HR9 211 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 CMSS1Q9BQ75 279 aaKnown RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 ARV1Q9H2C2 271 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 MED13Q9UHV7 2174 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 TCFL5Q9UL49 500 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 A0A0J9YW62 118 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 KLF7O75840 302 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 DBHP09172 617 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 MUC1P15941 1255 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 CHATP28329 748 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 SRD5A2P31213 254 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 FCGR2CP31995 323 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 RFC3P40938 356 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 HOXA1P49639 335 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM33P57088 247 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 MLF1P58340 268 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 OR8B8Q15620 311 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 RIPPLY2Q5TAB7 128 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM156Q8N614 296 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 OR2Y1Q8NGV0 311 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 BORCS8Q96FH0 119 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 GPR87Q9BY21 358 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 BCO1Q9HAY6 547 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF71Q9NQZ8 489 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 GPR173Q9NS66 373 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 FAM212BQ9NTI7 297 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms