RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RNF7Q9UBF6 113 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 OR14J1Q9UGF5 321 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ADAM30Q9UKF2 790 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ARID1AO14497 2285 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 FBN2P35556 2912 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 IGHV1-69-2A0A0G2JMI3 117 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 METTL21EPA6NDL7 271 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 FOXI3A8MTJ6 420 aaPredicted RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 SRRM5B3KS81 715 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 CLDN25C9JDP6 229 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 XRCC3O43542 346 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 HLA-DQB1P01920 261 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 GNB3P16520 340 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 TALDO1P37837 337 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 TAS2R20P59543 309 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 CDNFQ49AH0 187 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 PYDC2Q56P42 97 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 NKAPLQ5M9Q1 402 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM69Q5SWH9 247 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 C6orf201Q7Z4U5 140 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 CDH24Q86UP0 819 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 FAM89BQ8N5H3 189 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 OR11L1Q8NGX0 322 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 Q8TCH9 128 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 DYRK2Q92630 601 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 PHF21AQ96BD5 680 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 SDHCQ99643 169 aaPredicted RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 URM1Q9BTM9 101 aaKnown RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 RAB1BQ9H0U4 201 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 DIABLOQ9NR28 239 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 KCNK7Q9Y2U2 307 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 UBE2QL1A1L167 161 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 MEIOCA2RUB1 952 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM235A6NFC5 223 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 RFPL4AA6NLU0 287 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 RFPL4AL1F8VTS6 287 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM178BH3BS89 294 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 OVOL3O00110 214 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 SIRPB1O00241 398 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 HSPB6O14558 160 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 OR7C1O76099 320 aaPredicted RBP8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 FCER2P06734 321 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 ACAA1P09110 424 aaPredicted RBP8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 CPT2P23786 658 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 CFHR2P36980 270 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 ETV6P41212 452 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 IKZF1Q13422 519 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 ATAD3CQ5T2N8 411 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 Q6P435 159 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 LINC00299Q6ZSB3 139 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 BPIFB2Q8N4F0 458 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 OR56B1Q8NGI3 324 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 OR10Z1Q8NGY1 313 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 IGFBPL1Q8WX77 278 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 S100ZQ8WXG8 99 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 RDH5Q92781 318 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 CCL19Q99731 98 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 PECRQ9BY49 303 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 PCDHB16Q9NRJ7 776 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM106BQ9NUM4 274 aa8.17□□□□□ -1.1
SNRNP40-201ENST00000263694 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 IGKV1D-17A0A075B6S4 117 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 A0A1B0GW55 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 MEIS3P1A6NDR6 274 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 H7C417 338 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DEGS1O15121 323 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 LANCL1O43813 399 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 CHRM2P08172 466 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L5P0CJ88 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L6P0CJ89 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L7P0CJ90 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 PSG2P11465 335 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 IRF2P14316 349 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DGCR2P98153 550 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 ZNF846Q147U1 533 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 ZNF260Q3ZCT1 412 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DCDC5Q6ZRR9 648 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 Q6ZTK2 550 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 Q8IYB0 196 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 CD177Q8N6Q3 437 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 ERGIC1Q969X5 290 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 RAB3CQ96E17 227 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 MRPS24Q96EL2 167 aaKnown RBP8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 C14orf79Q96F83 325 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 SULT4A1Q9BR01 284 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 FAAP24Q9BTP7 215 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 SRRQ9GZT4 340 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 AUNIPQ9H7T9 357 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 PLEKHJ1Q9NW61 149 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 ING3Q9NXR8 418 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 NLKQ9UBE8 527 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 DNAJB11Q9UBS4 358 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms