RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 OTX2P32243 289 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 PLA2G5P39877 138 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 HOXA1P49639 335 aaPredicted RBP7.92□□□□□ -1.14
MSH4-201ENST00000263187 MEOX2P50222 304 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 POLR2GP62487 172 aaKnown RBP eCLIP7.92□□□□□ -1.14
MSH4-201ENST00000263187 CCL20P78556 96 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 LPAL2Q16609 132 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 IZUMO4Q1ZYL8 232 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 SLC25A26Q70HW3 274 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 MAML2Q8IZL2 1156 aaPredicted RBP7.92□□□□□ -1.14
MSH4-201ENST00000263187 NEK7Q8TDX7 302 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 ZNF845Q96IR2 970 aaPredicted RBP7.92□□□□□ -1.14
MSH4-201ENST00000263187 TP53RKQ96S44 253 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 JTBO76095 146 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 NRASP01111 189 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 ACAA1P09110 424 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 NQO2P16083 231 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 RBP2P50120 134 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 ZNF84P51523 738 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 DVL1P1P54792 670 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 PCOLCEQ15113 449 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 WIPI1Q5MNZ9 446 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 C10orf91Q5T1B1 145 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 Q6ZPA2 131 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SLC35G3Q8N808 338 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 ABHD3Q8WU67 409 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 PP6455Q8WZ26 134 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 NAT6Q93015 286 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 ZNF700Q9H0M5 742 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SMOC1Q9H4F8 434 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 PRDM6Q9NQX0 595 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 NECAP2Q9NVZ3 263 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 DNAJB11Q9UBS4 358 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 C19orf25Q9UFG5 118 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 V9GYS6 101 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 TRAV39A0A0B4J263 110 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 NKX2-6A6NCS4 301 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 CEACAM18A8MTB9 384 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 ZNF727A8MUV8 499 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 UMAD1C9J7I0 102 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 CD5P06127 495 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 CTSDP07339 412 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 EIF1P41567 113 aaKnown RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 HAGHQ16775 308 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 CEACAM16Q2WEN9 425 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 HLA-BQ31612 363 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SLC25A53Q5H9E4 307 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 KMT5CQ86Y97 462 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 TMEM123Q8N131 208 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 HIST1H2BAQ96A08 127 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SAT2Q96F10 170 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 NAA60Q9H7X0 242 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 PROK2Q9HC23 129 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SMCO4Q9NRQ5 59 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 CRIM1Q9NZV1 1036 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 EXPH5Q8NEV8 1989 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 LY6G6EA0A0G2JKS1 128 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 HSD17B6O14756 317 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SSSCA1O60232 199 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 UMODP07911 640 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 H2AFB1P0C5Y9 115 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 LYL1P12980 280 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 LIFP15018 202 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 EPHA1P21709 976 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 SUCLG1P53597 346 aaKnown RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 LSM6P62312 80 aaKnown RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 H3F3AP84243 136 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 RUNX1Q01196 453 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 TMEM187Q14656 261 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 ZNF385CQ66K41 422 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 FADS6Q8N9I5 356 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 NUDT16L1Q9BRJ7 211 aaKnown RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 FAM212BQ9NTI7 297 aaPredicted RBP7.91□□□□□ -1.14
MSH4-201ENST00000263187 MMP24Q9Y5R2 645 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 U3KQA8 63 aa7.91□□□□□ -1.14
MSH4-201ENST00000263187 C19orf67A6NJJ6 358 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 CXCL12P48061 93 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 CARD18P57730 90 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 RAB5BP61020 215 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 HERV-K104P61576 105 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 EIF5AP63241 154 aaKnown RBP7.9□□□□□ -1.14
MSH4-201ENST00000263187 PSG4Q00888 419 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 FABP9Q0Z7S8 132 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 PPA1Q15181 289 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 TSC22D1Q15714 1073 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 EIF2S3LQ2VIR3 472 aaKnown RBP7.9□□□□□ -1.14
MSH4-201ENST00000263187 CXorf66Q5JRM2 361 aaPredicted RBP7.9□□□□□ -1.14
MSH4-201ENST00000263187 NCMAPQ5T1S8 102 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 SLC16A14Q7RTX9 510 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 RPS19BP1Q86WX3 136 aaKnown RBP7.9□□□□□ -1.14
MSH4-201ENST00000263187 PRR18Q8N4B5 295 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 OR1F12Q8NHA8 337 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 ZNF488Q96MN9 340 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 FANCFQ9NPI8 374 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 C19orf12Q9NSK7 152 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 SPENQ96T58 3664 aaKnown RBP7.9□□□□□ -1.14
MSH4-201ENST00000263187 TRBV23-1A0A0A0MS06 115 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 A0A0U1RQV5 110 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 SSR4P51571 173 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms