RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 PAX6P26367 422 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 DUSP1P28562 367 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 PCOLCEQ15113 449 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 FAM27BQ5VT28 67 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 FAM213BQ8TBF2 198 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 HPSE2Q8WWQ2 592 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 DNASE2BQ8WZ79 361 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 MSI2Q96DH6 328 aaKnown RBP16.78■□□□□ 0.28
SCARB1-201ENST00000261693 CRLF2Q9HC73 371 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 ST3GAL6Q9Y274 331 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 LIFP15018 202 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 B4GALT1P15291 398 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 DTYMKP23919 212 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 NTF4P34130 210 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 PPP1CCP36873 323 aaKnown RBP16.78■□□□□ 0.28
SCARB1-201ENST00000261693 OR2B8PP59922 312 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 SUMF1Q8NBK3 374 aa16.78■□□□□ 0.28
SCARB1-201ENST00000261693 A0A1W2PPE2 198 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 ST8SIA3O43173 380 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 FABP9Q0Z7S8 132 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 CLINT1Q14677 625 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 Q6ZPA2 131 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 C5orf24Q7Z6I8 188 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 SLC35G3Q8N808 338 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 SLC39A7Q92504 469 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 ALKBH3Q96Q83 286 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-201ENST00000261693 TP53RKQ96S44 253 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 SUCNR1Q9BXA5 334 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 PROK2Q9HC23 129 aa16.77■□□□□ 0.28
SCARB1-201ENST00000261693 SYNGR3O43761 229 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 VAMP5O95183 116 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 NRASP01111 189 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 ITGA3P26006 1051 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 S100A12P80511 92 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 CNN3Q15417 329 aaKnown RBP16.77■□□□□ 0.27
SCARB1-201ENST00000261693 ADAM5Q6NVV9 412 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 MRPL14Q6P1L8 145 aaKnown RBP16.77■□□□□ 0.27
SCARB1-201ENST00000261693 ZNF561Q8N587 486 aa16.77■□□□□ 0.27
SCARB1-201ENST00000261693 GPR37O15354 613 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 AGAP20933 346 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 AADACP22760 399 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 GPR157Q5UAW9 335 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 LGI3Q8N145 548 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 OSR2Q8N2R0 312 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 OR1F12Q8NHA8 337 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 RARRES2Q99969 163 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 A0A087WZY1 265 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 UBE2CO00762 179 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 RAB5AP20339 215 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 OMGP23515 440 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 GLP1RP43220 463 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 SULT1A1P50225 295 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 UCP2P55851 309 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 MRPS34P82930 218 aaKnown RBP16.76■□□□□ 0.27
SCARB1-201ENST00000261693 RAB35Q15286 201 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 RNF212Q495C1 297 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 KCNJ16Q9NPI9 418 aa16.76■□□□□ 0.27
SCARB1-201ENST00000261693 LY6G6EA0A0G2JKS1 128 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 ZNF32P17041 273 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 HTR5AP47898 357 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 DSCR4P56555 118 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-201ENST00000261693 COMMD1Q8N668 190 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 LRTM2Q8N967 370 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 GPHA2Q96T91 129 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 PHF7Q9BWX1 381 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-201ENST00000261693 ZNF286AQ9HBT8 521 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 P4HTMQ9NXG6 502 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 U3KQA8 63 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 FAM24AA6NFZ4 105 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 LINC00587B1AMM8 73 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 ONECUT2O95948 504 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 S100A9P06702 114 aaKnown RBP16.75■□□□□ 0.27
SCARB1-201ENST00000261693 HOXB1P14653 301 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-201ENST00000261693 IGSF11Q5DX21 431 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 ANGPTL4Q9BY76 406 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 SLC35B3Q9H1N7 401 aa16.75■□□□□ 0.27
SCARB1-201ENST00000261693 SLC33A1O00400 549 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-201ENST00000261693 HERV-K104P61576 105 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 IL13RA2Q14627 380 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 LHFPL2Q6ZUX7 228 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 PIGCQ92535 297 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 SLAMF9Q96A28 289 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 MOB3AQ96BX8 217 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 SYT3Q9BQG1 590 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 ABHD14AQ9BUJ0 271 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 ZNF442Q9H7R0 627 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 BCO1Q9HAY6 547 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 PUS1Q9Y606 427 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCARB1-201ENST00000261693 ZNF407Q9C0G0 2248 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 NKX2-6A6NCS4 301 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 TERTO14746 1132 aaKnown RBP16.74■□□□□ 0.27
SCARB1-201ENST00000261693 ZNHIT1O43257 154 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 NQO2P16083 231 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 EWSR1Q01844 656 aaKnown RBP eCLIP16.74■□□□□ 0.278e-7■■■□□ 16.1
SCARB1-201ENST00000261693 ZNF92Q03936 586 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 GNMTQ14749 295 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 NIT2Q9NQR4 276 aa16.74■□□□□ 0.27
SCARB1-201ENST00000261693 CCDC163A0A0D9SF12 145 aa16.73■□□□□ 0.27
SCARB1-201ENST00000261693 CDRT15L2A8MXV6 281 aa16.73■□□□□ 0.27
SCARB1-201ENST00000261693 OR7C1O76099 320 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms