RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 HKR1P10072 659 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 NR2C1P13056 603 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 THEM4Q5T1C6 240 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 C5orf46Q6UWT4 87 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 IFI44Q8TCB0 444 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
PALB2-201ENST00000261584 SIRPB1O00241 398 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 GRPP07492 148 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 SLC25A4P12235 298 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 ZNF708P17019 499 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 AADACP22760 399 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 CHRNA7P36544 502 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 APOBEC1P41238 236 aaKnown RBP8.87□□□□□ -0.99
PALB2-201ENST00000261584 HOGA1Q86XE5 327 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 NOXO1Q8NFA2 376 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 ZNF721Q8TF20 911 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 PSMF1Q92530 271 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 RSG1Q9BU20 258 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 ALX4Q9H161 411 aaPredicted RBP8.87□□□□□ -0.99
PALB2-201ENST00000261584 SLC2A9Q9NRM0 540 aa8.87□□□□□ -0.99
PALB2-201ENST00000261584 C5orf49A4QMS7 147 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ZNF587BE7ETH6 402 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 DYNLT3P51808 116 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 RNF212Q495C1 297 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ASPHD2Q6ICH7 369 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ZNF610Q8N9Z0 462 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 RNF133Q8WVZ7 376 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 AQP3Q92482 292 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 TRAPPC2LQ9UL33 140 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 MMP17Q9ULZ9 603 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 LHFPL6Q9Y693 200 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 CCDC187A0A096LP49 1063 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 KRASP01116 189 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 P04436 131 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ATP6V0CP27449 155 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 GALNSP34059 522 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 CCL20P78556 96 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 HABP2Q14520 560 aaPredicted RBP8.86□□□□□ -0.99
PALB2-201ENST00000261584 CEACAM16Q2WEN9 425 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 DPPA2Q7Z7J5 298 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 RFESDQ8TAC1 157 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 FLVCR1-AS1Q8TAF5 88 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 RAB39BQ96DA2 213 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ANXA10Q9UJ72 324 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 DHHO43323 396 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ZNF345Q14585 488 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 UBE2V2Q15819 145 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ZNF100Q8IYN0 542 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 OR2C3Q8N628 320 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 CCDC54Q8NEL0 328 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 LHX4Q969G2 390 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 SMIM7Q9BQ49 75 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 ATG101Q9BSB4 218 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 SLC25A22Q9H936 323 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 SLC17A5Q9NRA2 495 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 MMACHCQ9Y4U1 282 aa8.86□□□□□ -0.99
PALB2-201ENST00000261584 FREM2Q5SZK8 3169 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 A0A0A6YYD4 124 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 A0A1W2PNV4 684 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 BLACEA4D250 179 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF814B7Z6K7 855 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 TRAPPC2LH3BP13 241 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 CHST1O43916 411 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF32P17041 273 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 EGR1P18146 543 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 DCDP81605 110 aaKnown RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 BAXQ07812 192 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF684Q5T5D7 378 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF66Q6ZN08 573 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 MKXQ8IYA7 352 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 OR4F5Q8NH21 305 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 EDAQ92838 391 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 OR4F4Q96R69 305 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 FAM103A1Q9BTL3 118 aaKnown RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 NMES1Q9C002 83 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 DOK5Q9P104 306 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ANAPC1Q9H1A4 1944 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 UBE2L5PA0A1B0GUS4 154 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 C2CD4DB7Z1M9 353 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 NPIPB9F8W1W9 429 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 HEXAP06865 529 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 MRPS21P82921 87 aaKnown RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 SURF2Q15527 256 aaPredicted RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 SNAI3Q3KNW1 292 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 WIPI1Q5MNZ9 446 aaPredicted RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 COMMD1Q8N668 190 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 LRRC75AQ8NAA5 344 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 TMEM230Q96A57 120 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 C19orf25Q9UFG5 118 aaPredicted RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 NOTCH3Q9UM47 2321 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 A0A087X0M5 115 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 A0A1B0GX30 115 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 MMP16P51512 607 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF816Q0VGE8 651 aaPredicted RBP8.85□□□□□ -0.99
PALB2-201ENST00000261584 EDDM3AQ14507 147 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 ZNF266Q14584 549 aa8.85□□□□□ -0.99
PALB2-201ENST00000261584 CNN3Q15417 329 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms