RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SHISA8B8ZZ34 492 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 ZNF587BE7ETH6 402 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 TSTD3H0UI37 97 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 H7C1Q1 480 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 CBR3O75828 277 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 PTBP3O95758 552 aaKnown RBP9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 OR13C7P0DN81 318 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 GUCA1AP43080 201 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 IL13RA2Q14627 380 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST3H3Q16695 136 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 CHRFAM7AQ494W8 412 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 PRAMEF20Q5VT98 475 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 LINC00346Q8IVM7 164 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST3H2BBQ8N257 126 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 OR10D4PQ8NGN7 298 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 HPSE2Q8WWQ2 592 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 LOXL4Q96JB6 756 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 WFDC1Q9HC57 220 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 DKKL1Q9UK85 242 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 PADI1Q9ULC6 663 aa9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 PUS1Q9Y606 427 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHRNA1-201ENST00000261007 SDK1Q7Z5N4 2213 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 IGKV1D-43A0A0B4J1Z2 117 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 SERPINE3A8MV23 424 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 K7N7A8 449 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 SDCBPO00560 298 aaPredicted RBP9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 KNG1P01042 644 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 RNF224P0DH78 156 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 BTF3P20290 206 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 DDTP30046 118 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 ALDH3B1P43353 468 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 LSM6P62312 80 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 GRB2P62993 217 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 CHAF1BQ13112 559 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 ELOBQ15370 118 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 UBE2V2Q15819 145 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 ZNF674Q2M3X9 581 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 SULF2Q8IWU5 870 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 S100PBPQ96BU1 408 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 PIGQQ9BRB3 760 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 EMC6Q9BV81 110 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 ST6GALNAC5Q9BVH7 336 aa9.42□□□□□ -0.9
CHRNA1-201ENST00000261007 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 H3BQ15 152 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 MBPP02686 304 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SFTPDP35247 375 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 CEACAM6P40199 344 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 OR3A4PP47883 348 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 ZNF133P52736 654 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 RAC1P63000 192 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 GABREP78334 506 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 H3F3AP84243 136 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SSPNQ14714 243 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 RSU1Q15404 277 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 C6orf15Q6UXA7 325 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 LRTM2Q8N967 370 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 CCDC54Q8NEL0 328 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 OR5R1Q8NH85 324 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SSC4DQ8WTU2 575 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 KCNE4Q8WWG9 221 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 MRPL24Q96A35 216 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 DDA1Q9BW61 102 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 BANF2Q9H503 90 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 ZNF160Q9HCG1 818 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 KCNIP3Q9Y2W7 256 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 FREM3P0C091 2139 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 OR5H15A6NDH6 313 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 OR5H1A6NKK0 313 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 MKRN2OSH3BPM6 223 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 CRTAPO75718 401 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 P04436 131 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 CCL3P10147 92 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 TAGLN2P37802 199 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 MPLP40238 635 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SPCS3P61009 180 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 NKX6-1P78426 367 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 RAET1LQ5VY80 246 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 CDPF1Q6NVV7 123 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SLC22A25Q6T423 547 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 Q8WTZ3 238 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 RAB39BQ96DA2 213 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 BSCL2Q96G97 398 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 SF3B5Q9BWJ5 86 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms