RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SLC25A38Q96DW6 304 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 Q96M66 194 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 NICN1Q9BSH3 213 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 NXF2Q9GZY0 626 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 LPAR5Q9H1C0 372 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 ZNF581Q9P0T4 197 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 ST3GAL6Q9Y274 331 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 ETV7Q9Y603 341 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 IGKV1D-17A0A075B6S4 117 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 RFPL4AA6NLU0 287 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 RFPL4AL1F8VTS6 287 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 GEMIN2O14893 280 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 KNG1P01042 644 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 HNRNPCP07910 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 PSG2P11465 335 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 AMY2BP19961 511 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 RAB6AP20340 208 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 GIFP27352 417 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 GPR6P46095 362 aaPredicted RBP13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 CEBPDP49716 269 aaPredicted RBP13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 ZNF146Q15072 292 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 TAF9Q16594 264 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 STUMQ69YW2 141 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 MCFD2Q8NI22 146 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 C10orf105Q8TEF2 133 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 FAM168AQ92567 244 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 PTX4Q96A99 478 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 TIMD4Q96H15 378 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 BPESC1Q9GZL8 116 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM165Q9HC07 324 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 OR14J1Q9UGF5 321 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 RAB22AQ9UL26 194 aa13.22□□□□□ -0.29
CCDC90B-201ENST00000260054 A0A075B6Q4 140 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 A0A0A6YYD4 124 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 TRAV38-1A0A0B4J264 116 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 CTDSP2O14595 271 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 FSTL3O95633 263 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 GYPAP02724 150 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 SPIN3Q5JUX0 258 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 FIP1L1Q6UN15 594 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 CLEC2AQ6UVW9 174 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 CD177Q8N6Q3 437 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 SAMD12Q8N8I0 201 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 ANGPTL6Q8NI99 470 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 RAB1CQ92928 201 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 TM2D1Q9BX74 207 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 C6orf62Q9GZU0 229 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 PALMDQ9NP74 551 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 ZNF222Q9UK12 451 aa13.21□□□□□ -0.29
CCDC90B-201ENST00000260054 ISPDA4D126 451 aa13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 HPGDSO60760 199 aa13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 HAND1O96004 215 aa13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 CSF3P09919 207 aa13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 MDH2P40926 338 aaKnown RBP13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 IL13RA2Q14627 380 aa13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 MZT2AQ6P582 158 aa13.21□□□□□ -0.3
CCDC90B-201ENST00000260054 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 IGHV4-30-2A0A087WSY4 118 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 A0A1B0GW55 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 NDUFS8O00217 210 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L2P0CJ85 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L3P0CJ86 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L4P0CJ87 422 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L5P0CJ88 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L6P0CJ89 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L7P0CJ90 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 CPT2P23786 658 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 GABRR1P24046 479 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 PRDX2P32119 198 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 ART1P52961 327 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 CLEC12BQ2HXU8 276 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 UBE2NLQ5JXB2 153 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 Q5PR19 223 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 SIGIRRQ6IA17 410 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 Q6P435 159 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4L9Q6RFH8 374 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 LYPD2Q6UXB3 125 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 KRTAP1-3Q8IUG1 177 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM89BQ8N5H3 189 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 URM1Q9BTM9 101 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 MIXL1Q9H2W2 232 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 DUX4Q9UBX2 424 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
CCDC90B-201ENST00000260054 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 RGS5O15539 181 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 OR7C1O76099 320 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 OR2H2O95918 312 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 EIF4EP06730 217 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 GABRA2P47869 451 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 VEGFCP49767 419 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 DSCR9P59020 149 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 SCN1BQ07699 218 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 IKZF1Q13422 519 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms