RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 LOC102725191A0A1B0GVB3 256 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 SYNGR3O43761 229 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 SLC25A26Q70HW3 274 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 FBXL14Q8N1E6 418 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 AQP3Q92482 292 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 ADGRG7Q96K78 797 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 SF3B5Q9BWJ5 86 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 NDRG3Q9UGV2 375 aa12.7□□□□□ -0.38
TRAFD1-201ENST00000257604 C9orf170A2RU37 121 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 TMEM14DPA8MWL7 114 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 GEMIN2O14893 280 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 LYZL6O75951 148 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 SWI5Q1ZZU3 235 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 SPAG16Q8N0X2 631 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 OR56B2PQ8NGI1 322 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 OR51F2Q8NH61 342 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 CPT1CQ8TCG5 803 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 RXFP4Q8TDU9 374 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 LOXL4Q96JB6 756 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 RCC1P18754 421 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 GSK3AP49840 483 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 GPM6AP51674 278 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 LYG2Q86SG7 212 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 OR4A4PQ8NGN8 299 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 RSRP1Q9BUV0 290 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF552Q9H707 407 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 CHMP1AQ9HD42 196 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 RELNP78509 3460 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 IGKV1-27A0A075B6S5 117 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 LOC390937A0A1W2PQ73 354 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 GLRA1P23415 457 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 ZBTB25P24278 435 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 HOXA1P49639 335 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 EIF3IQ13347 325 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF585AQ6P3V2 769 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF488Q96MN9 340 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 PHB2Q99623 299 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 CHST5Q9GZS9 411 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
TRAFD1-201ENST00000257604 IGKV1D-8A0A087WSZ0 117 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 TRGV5A0A0B4J1U4 118 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 CYTIPO60759 359 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 SFTPBP07988 381 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 HOXB5P09067 269 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 SELEP16581 610 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 NPBWR2P48146 333 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 QRFPP83859 136 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 DRAM2Q6UX65 266 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 MRPL21Q7Z2W9 205 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 INTS12Q96CB8 462 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 TRIB1Q96RU8 372 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF442Q9H7R0 627 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 KLF13Q9Y2Y9 288 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 SMG1Q96Q15 3661 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 HPNP05981 417 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 RBP2P50120 134 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 NOVA1P51513 510 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 CLN3Q13286 438 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 C1orf147Q96MC9 270 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 PARPBPQ9NWS1 579 aa12.68□□□□□ -0.38
TRAFD1-201ENST00000257604 SCAND1P57086 179 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF345Q14585 488 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 MED12LQ86YW9 2145 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 CALHM1Q8IU99 346 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 ADAMTS17Q8TE56 1095 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 CNTNAP3BQ96NU0 1288 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 PRRT1Q99946 306 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 COA4Q9NYJ1 87 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 IL36RNQ9UBH0 155 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 SLC7A11Q9UPY5 501 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 TXNL1O43396 289 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 IDH3GP51553 393 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 PIK3IP1Q96FE7 263 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 GPHA2Q96T91 129 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 FN3KRPQ9HA64 309 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 ST3GAL6Q9Y274 331 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 STARD10Q9Y365 291 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 KLF2Q9Y5W3 355 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 APOC1P02654 83 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 CST2P09228 141 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 SLC25A4P12235 298 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 PSMB6P28072 239 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 CD80P33681 288 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 THBS4P35443 961 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 CYB5R2Q6BCY4 276 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 LYPD6Q86Y78 171 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 HAS2Q92819 552 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 SLAMF9Q96A28 289 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms