RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RELBQ01201 579 aa17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 PDZK1IP1Q13113 114 aa17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 ZNF782Q6ZMW2 699 aaPredicted RBP17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 OR8H2Q8N162 312 aa17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 CHST6Q9GZX3 395 aa17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 ZCCHC4Q9H5U6 513 aa17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 FGF20Q9NP95 211 aaPredicted RBP17.26■□□□□ 0.35
HCFC1R1-201ENST00000248089 TMEM82A0PJX8 343 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 ANKRD65E5RJM6 399 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 ETV1P50549 477 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 ERVFRD-1P60508 538 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 TAF9Q16594 264 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 TTC23Q5W5X9 447 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 RNF144BQ7Z419 303 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 PACRGLQ8N7B6 248 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 SGMS2Q8NHU3 365 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 HEXA-AS1Q9H8Q6 139 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 C8orf4Q9NR00 106 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 VPREB3Q9UKI3 123 aa17.25■□□□□ 0.35
HCFC1R1-201ENST00000248089 POM121CA8CG34 1229 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 RPSAP08865 295 aaKnown RBP17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 BMXP51813 675 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 GRK1Q15835 563 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 MIDNQ504T8 468 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 DHRSXQ8N5I4 330 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 SETD9Q8NE22 299 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 HAVCR2Q8TDQ0 301 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 C17orf50Q8WW18 174 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 SNX22Q96L94 193 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 JAM3Q9BX67 310 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 BEX1Q9HBH7 125 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 GLS2Q9UI32 602 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 GSTK1Q9Y2Q3 226 aa17.24■□□□□ 0.35
HCFC1R1-201ENST00000248089 IGKV1-12A0A0C4DH73 117 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 IRGMA1A4Y4 181 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 SIRPB1O00241 398 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 SULT1B1O43704 296 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 NDUFA7O95182 113 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 IGKV1D-12P01611 117 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 MT-ND2P03891 347 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 MYL12AP19105 171 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 DCKP27707 260 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 SOX2P48431 317 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 RPL15P61313 204 aaKnown RBP17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 SPIN3Q5JUX0 258 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 OR2G6Q5TZ20 316 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 XAF1Q6GPH4 301 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 TMPRSS11AQ6ZMR5 421 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 GDPGP1Q6ZNW5 385 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 C17orf107Q6ZR85 190 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 SERPINA12Q8IW75 414 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 C11orf42Q8N5U0 333 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 TPRX1Q8N7U7 411 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 ZSCAN4Q8NAM6 433 aaPredicted RBP17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 OR5D14Q8NGL3 314 aa17.23■□□□□ 0.35
HCFC1R1-201ENST00000248089 A0A1B0GUS0 222 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 ZNF728P0DKX0 622 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 PAX6P26367 422 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 DLX6P56179 175 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 DHRS7BQ6IAN0 325 aaPredicted RBP17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 OR52N4Q8NGI2 321 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 HMG20AQ9NP66 347 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 EXOSC4Q9NPD3 245 aaKnown RBP17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 PCDHGB5Q9Y5G0 923 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 MMP24Q9Y5R2 645 aa17.22■□□□□ 0.35
HCFC1R1-201ENST00000248089 PKD1L1Q8TDX9 2849 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 H3BUX3 64 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 PSPNO60542 156 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 KDM4BO94953 1096 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 TMEM225BP0DP42 221 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 LGALS4P56470 323 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 ADARB1P78563 741 aaKnown RBP17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 ZNF146Q15072 292 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 CDK5R1Q15078 307 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 KISS1Q15726 138 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 OLFML2AQ68BL7 652 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 TCF23Q7RTU1 214 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 PARP16Q8N5Y8 322 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 BEND2Q8NDZ0 799 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 OR4S1Q8NGB4 309 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 OR5R1Q8NH85 324 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 RGP1Q92546 391 aaPredicted RBP17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 ZNF714Q96N38 554 aa17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 DIMT1Q9UNQ2 313 aaKnown RBP17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 EXOSC1Q9Y3B2 195 aaKnown RBP17.21■□□□□ 0.35
HCFC1R1-201ENST00000248089 hADV38S2A0JD32 116 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 CLPSL1A2RUU4 121 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 C17orf98A8MV24 154 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 SH2D1BO14796 132 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 RAB3AP20336 220 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 OR3A1P47881 315 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 SCN1BQ07699 218 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 IL18R1Q13478 541 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 RPL22L1Q6P5R6 122 aaKnown RBP17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 TRAPPC6BQ86SZ2 158 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 PPP1R35Q8TAP8 253 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 WFDC12Q8WWY7 111 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 SSX3Q99909 188 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 TAS2R4Q9NYW5 299 aa17.2■□□□□ 0.34
HCFC1R1-201ENST00000248089 MGST3O14880 152 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms