RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FGFRL1Q8N441 504 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 ANGPTL6Q8NI99 470 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 KCNG3Q8TAE7 436 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 TMEM246Q9BRR3 403 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 TMEM59Q9BXS4 323 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 RASL12Q9NYN1 266 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 SPATA2Q9UM82 520 aa16.83■□□□□ 0.28
SNRPA-201ENST00000243563 PRRC2AP48634 2157 aaKnown RBP16.83■□□□□ 0.28
SNRPA-201ENST00000243563 CYSRT1A8MQ03 144 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 EIF4EP06730 217 aaKnown RBP16.82■□□□□ 0.28
SNRPA-201ENST00000243563 GTF2F2P13984 249 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 SOX6P35712 828 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 GPR6P46095 362 aaPredicted RBP16.82■□□□□ 0.28
SNRPA-201ENST00000243563 ZNF404Q494X3 552 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 Q6P435 159 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 SAMD12Q8N8I0 201 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 DTX3Q8N9I9 347 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 FAM168AQ92567 244 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 KCTD12Q96CX2 325 aaKnown RBP16.82■□□□□ 0.28
SNRPA-201ENST00000243563 CST11Q9H112 138 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 AKAP9Q99996 3911 aa16.82■□□□□ 0.28
SNRPA-201ENST00000243563 VWC2LB2RUY7 222 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 ZNF780AO75290 641 aaPredicted RBP16.81■□□□□ 0.28
SNRPA-201ENST00000243563 KNG1P01042 644 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 TMEM33P57088 247 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 GPR176Q14439 515 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 ZNF146Q15072 292 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 NHLRC3Q5JS37 347 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 Q5PR19 223 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 LRRC28Q86X40 367 aaPredicted RBP16.81■□□□□ 0.28
SNRPA-201ENST00000243563 CCL13Q99616 98 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 TM2D1Q9BX74 207 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 MYOZ1Q9NP98 299 aaPredicted RBP16.81■□□□□ 0.28
SNRPA-201ENST00000243563 CTSZQ9UBR2 303 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 EDARQ9UNE0 448 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 ISPDA4D126 451 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 FOXI3A8MTJ6 420 aaPredicted RBP16.81■□□□□ 0.28
SNRPA-201ENST00000243563 SOCS1O15524 211 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 HAND1O96004 215 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 GABRR1P24046 479 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 BMXP51813 675 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 MICBQ29980 383 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 CLEC12BQ2HXU8 276 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 BRICD5Q6PL45 260 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 CLEC2AQ6UVW9 174 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 LAX1Q8IWV1 398 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 CMTM4Q8IZR5 234 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 FAM216BQ8N7L0 139 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 MCFD2Q8NI22 146 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 GAFA1Q96PS6 74 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 RHOFQ9HBH0 211 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 RHBDL2Q9NX52 303 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 RAB22AQ9UL26 194 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 ETV7Q9Y603 341 aa16.81■□□□□ 0.28
SNRPA-201ENST00000243563 A0A075B6Q4 140 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 SIRPB1O00241 398 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 OR2H2O95918 312 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 MUC1P15941 1255 aaPredicted RBP16.8■□□□□ 0.28
SNRPA-201ENST00000243563 ELK1P19419 428 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 RAB6AP20340 208 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 PRDX2P32119 198 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 MDH2P40926 338 aaKnown RBP16.8■□□□□ 0.28
SNRPA-201ENST00000243563 VEGFCP49767 419 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 CAPZA1P52907 286 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 SCN1BQ07699 218 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 MADCAM1Q13477 382 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 RAB1CQ92928 201 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 C6orf62Q9GZU0 229 aaPredicted RBP16.8■□□□□ 0.28
SNRPA-201ENST00000243563 MAB21L2Q9Y586 359 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 ABCA2Q9BZC7 2435 aa16.8■□□□□ 0.28
SNRPA-201ENST00000243563 CR1P17927 2039 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 FLNBO75369 2602 aaKnown RBP16.79■□□□□ 0.28
SNRPA-201ENST00000243563 TRAV38-1A0A0B4J264 116 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 TRAV24A0A0B4J272 114 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 TMEM82A0PJX8 343 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 CEACAM18A8MTB9 384 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 GABRA2P47869 451 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 TMEM50BP56557 158 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 COL10A1Q03692 680 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 IKZF1Q13422 519 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 SPIN3Q5JUX0 258 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 ZNF788Q6ZQV5 615 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 FAM89BQ8N5H3 189 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 ACOT12Q8WYK0 555 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 AP3S1Q92572 193 aa16.79■□□□□ 0.28
SNRPA-201ENST00000243563 RAB27BO00194 218 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 PSPNO60542 156 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 TMEM127O75204 238 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 NR4A2P43354 598 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 SCAND1P57086 179 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 SEC61A1P61619 476 aaKnown RBP16.78■□□□□ 0.28
SNRPA-201ENST00000243563 IL13RA2Q14627 380 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 UBE2NLQ5JXB2 153 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 PEG10Q86TG7 708 aaKnown RBP16.78■□□□□ 0.28
SNRPA-201ENST00000243563 IZUMO1Q8IYV9 350 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 ZNRF1Q8ND25 227 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 PTX4Q96A99 478 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 MRPS24Q96EL2 167 aaKnown RBP16.78■□□□□ 0.28
SNRPA-201ENST00000243563 TIMD4Q96H15 378 aa16.78■□□□□ 0.28
SNRPA-201ENST00000243563 ATG5Q9H1Y0 275 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms