RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ZNF696Q9H7X3 374 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 RPL36Q9Y3U8 105 aaKnown RBP11.58□□□□□ -0.56
GPN3-201ENST00000228827 TRBV2A0A0J9YWF9 115 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 H3BUX3 64 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 DLX6P56179 175 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 LGALS4P56470 323 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 KRTAP10-3P60369 221 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 PDZK1IP1Q13113 114 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 GRK1Q15835 563 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 ZSCAN26Q16670 478 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 LRRC36Q1X8D7 754 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 OR8H2Q8N162 312 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 SYS1Q8N2H4 156 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 OR52N4Q8NGI2 321 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 AJUBAQ96IF1 538 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 SNX22Q96L94 193 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 MYCBPQ99417 103 aaPredicted RBP11.57□□□□□ -0.56
GPN3-201ENST00000228827 SSX3Q99909 188 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 PDCD1LG2Q9BQ51 273 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 ZNF649Q9BS31 505 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 PPA2Q9H2U2 334 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 INPP5EQ9NRR6 644 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 SMPD3Q9NY59 655 aaPredicted RBP11.57□□□□□ -0.56
GPN3-201ENST00000228827 IGKV1-12A0A0C4DH73 117 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 C17orf98A8MV24 154 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 SIRPB1O00241 398 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 CLIC3O95833 236 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 IGKV1D-12P01611 117 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 GBX2P52951 348 aaPredicted RBP11.57□□□□□ -0.56
GPN3-201ENST00000228827 KLHL22Q53GT1 634 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 LHFPL4Q7Z7J7 247 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 ZSCAN4Q8NAM6 433 aaPredicted RBP11.57□□□□□ -0.56
GPN3-201ENST00000228827 OR5AK2Q8NH90 309 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 TSEN15Q8WW01 171 aaKnown RBP11.57□□□□□ -0.56
GPN3-201ENST00000228827 ZCCHC4Q9H5U6 513 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 GSTK1Q9Y2Q3 226 aa11.57□□□□□ -0.56
GPN3-201ENST00000228827 TMEM212A6NML5 194 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 PSPNO60542 156 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 WBP4O75554 376 aaKnown RBP11.56□□□□□ -0.56
GPN3-201ENST00000228827 ZFPL1O95159 310 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 HCKP08631 526 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 ZNF728P0DKX0 622 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 PEX2P28328 305 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 GTF2A1P52655 376 aaPredicted RBP11.56□□□□□ -0.56
GPN3-201ENST00000228827 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 PLA1AQ53H76 456 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 TCF23Q7RTU1 214 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 OR4S1Q8NGB4 309 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 CNIH3Q8TBE1 160 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 CYGBQ8WWM9 190 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 ZNF714Q96N38 554 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 HMG20AQ9NP66 347 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 MRPS18AQ9NVS2 196 aaKnown RBP11.56□□□□□ -0.56
GPN3-201ENST00000228827 GLS2Q9UI32 602 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 DHDHQ9UQ10 334 aa11.56□□□□□ -0.56
GPN3-201ENST00000228827 hADV38S2A0JD32 116 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 MT-ND2P03891 347 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 ARG1P05089 322 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 CCDC159P0C7I6 412 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 LIMS3P0CW19 117 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 LIMS4P0CW20 117 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 TGFBR2P37173 567 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 MEF2CQ06413 473 aaPredicted RBP11.55□□□□□ -0.56
GPN3-201ENST00000228827 MRPL28Q13084 256 aaKnown RBP11.55□□□□□ -0.56
GPN3-201ENST00000228827 DYNC1I2Q13409 638 aaKnown RBP11.55□□□□□ -0.56
GPN3-201ENST00000228827 ZNF146Q15072 292 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 LPCAT4Q643R3 524 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 TREML4Q6UXN2 200 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 SERPINA12Q8IW75 414 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 MEGF9Q9H1U4 602 aa11.55□□□□□ -0.56
GPN3-201ENST00000228827 EXOSC4Q9NPD3 245 aaKnown RBP11.55□□□□□ -0.56
GPN3-201ENST00000228827 SH2D1BO14796 132 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 SULT1B1O43704 296 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 KDM4BO94953 1096 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 OR2H2O95918 312 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 IGHV1-8P0DP01 117 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 OR3A1P47881 315 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 SOX2P48431 317 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 ETV1P50549 477 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 PROK1P58294 105 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 SCN1BQ07699 218 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 IL18R1Q13478 541 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 SPIN3Q5JUX0 258 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 ZNF691Q5VV52 312 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 CRIP3Q6Q6R5 217 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 TRAPPC6BQ86SZ2 158 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 OR5D14Q8NGL3 314 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 RDH12Q96NR8 316 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 CITED1Q99966 193 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 FGF20Q9NP95 211 aaPredicted RBP11.54□□□□□ -0.56
GPN3-201ENST00000228827 ING3Q9NXR8 418 aa11.54□□□□□ -0.56
GPN3-201ENST00000228827 MGST3O14880 152 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms