RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 OR1N1Q8NGS0 311 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 SLAMF6Q96DU3 332 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 LIN37Q96GY3 246 aaPredicted RBP12.31□□□□□ -0.44
SF1-201ENST00000227503 NIPSNAP3BQ9BS92 247 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 MAGT1Q9H0U3 335 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 NSG2Q9Y328 171 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 TMED3Q9Y3Q3 217 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 COL5A1P20908 1838 aaPredicted RBP12.31□□□□□ -0.44
SF1-201ENST00000227503 COL6A3P12111 3177 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 ELOA3CA0A087WX78 387 aaPredicted RBP12.31□□□□□ -0.44
SF1-201ENST00000227503 NSG1A0A0A6YYJ2 146 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 A0A1W2PR77 199 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 GABRR1P24046 479 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 GLIPR1P48060 266 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 FAM180AQ6UWF9 173 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 PRSS58Q8IYP2 241 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 TMEM217Q8N7C4 229 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 OR11L1Q8NGX0 322 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 OR1L3Q8NH93 324 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 M1APQ8TC57 530 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 TVP23CQ96ET8 276 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 SCGB3A2Q96PL1 93 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
SF1-201ENST00000227503 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 MBP02144 154 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 OPN1LWP04000 364 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 TUBG1P23258 451 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 FOXO1Q12778 655 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 PRSS8Q16651 343 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 FBXW12Q6X9E4 464 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 STT3BQ8TCJ2 826 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 SHDQ96IW2 340 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 SLC7A11Q9UPY5 501 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 DOCK11Q5JSL3 2073 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 IGHV1OR15-9A0A0B4J2B8 117 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 MS4A18H0YCH9 400 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 MKRN2OSH3BPM6 223 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 GPR137BO60478 399 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 CHRM2P08172 466 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 PCP4P48539 62 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 P2RY6Q15077 328 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 MS4A18Q3C1V0 323 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 MEX3BQ6ZN04 569 aaKnown RBP12.3□□□□□ -0.44
SF1-201ENST00000227503 LRRC18Q8N456 261 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 HAS2Q92819 552 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 GPR87Q9BY21 358 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 GPR84Q9NQS5 396 aa12.3□□□□□ -0.44
SF1-201ENST00000227503 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 MSTNO14793 375 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 CST7O76096 145 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 FGF7P21781 194 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 CD38P28907 300 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 CDAP32320 146 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 RAB11AP62491 216 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 RELQ04864 619 aaPredicted RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 KLHL24Q6TFL4 600 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 C20orf196Q8IYI0 205 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 SMRP1Q8NCR6 262 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 PLPP5Q8NEB5 264 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 COPS7AQ9UBW8 275 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 IL17BQ9UHF5 180 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 ANAPC10Q9UM13 185 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 CCDC187A0A096LP49 1063 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 NPSP0C0P6 89 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 TMEM225BP0DP42 221 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 PAX1P15863 534 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 PNLIPP16233 465 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 EPHA1P21709 976 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 FBLP22087 321 aaKnown RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 PRSS12P56730 875 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 POU3F1Q03052 451 aaPredicted RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
SF1-201ENST00000227503 OR2AJ1Q8NGZ0 328 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 ASB10Q8WXI3 467 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 C11orf40Q8WZ69 217 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
SF1-201ENST00000227503 MUC3AQ02505 3323 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 E9PLN8 166 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.443e-6■□□□□ 9.5
SF1-201ENST00000227503 GAB2Q9UQC2 676 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 FRYLO94915 3013 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 IGKV1-9A0A0C4DH69 117 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 CRYM-AS1A6NIL9 109 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 A6NIZ1 184 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 SHISA8B8ZZ34 492 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 CSNK1A1P48729 337 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 OR1D5P58170 312 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 RAP1BP61224 184 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 RPL23AP62750 156 aaKnown RBP12.28□□□□□ -0.44
SF1-201ENST00000227503 CFHR1Q03591 330 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 RAB30Q15771 203 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 C1orf87Q8N0U7 546 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 OR4X1Q8NH49 305 aa12.28□□□□□ -0.44
SF1-201ENST00000227503 OR5R1Q8NH85 324 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms