RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RPA2P15927 270 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 S100A11P31949 105 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 PPP1CBP62140 327 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 PDCD1Q15116 288 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 MPV17LQ2QL34 196 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 KCTD9Q7L273 389 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 ZNF442Q9H7R0 627 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 F8VVB4 439 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 F8VWA3 439 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 PI3P19957 117 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 GLRA1P23415 457 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 SPATA46Q5T0L3 261 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 TMEM65Q6PI78 240 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 PKIBQ9C010 78 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 PLK3Q9H4B4 646 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 ZNF286AQ9HBT8 521 aa25.42■■□□□ 1.66
PABPN1-201ENST00000216727 RCC2Q9P258 522 aaKnown RBP25.42■■□□□ 1.66
PABPN1-201ENST00000216727 FRYQ5TBA9 3013 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 MBD3L4A6NDZ8 208 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 MBD3L3A6NE82 208 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 MBD3L5A6NJ08 208 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 NOS1APO75052 506 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 TNFSF13O75888 250 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 IGKV3-15P01624 115 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 PDGFAP04085 211 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 HOXC12P31275 282 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 IL24Q13007 206 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 HAGHLQ6PII5 290 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 MBD3L2Q8NHZ7 208 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 COMMD9Q9P000 198 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 C14orf166Q9Y224 244 aaKnown RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 RPS2P15880 293 aaKnown RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 CA6P23280 308 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 TMUB2Q71RG4 321 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 BATF2Q8N1L9 274 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 WDR31Q8NA23 367 aa25.41■■□□□ 1.66
PABPN1-201ENST00000216727 COL25A1Q9BXS0 654 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-201ENST00000216727 ERVH48-1M5A8F1 160 aa25.4■■□□□ 1.66
PABPN1-201ENST00000216727 SYNGR1O43759 233 aa25.4■■□□□ 1.66
PABPN1-201ENST00000216727 SLC25A4P12235 298 aa25.4■■□□□ 1.66
PABPN1-201ENST00000216727 EXOSC2Q13868 293 aaKnown RBP25.4■■□□□ 1.66
PABPN1-201ENST00000216727 LINC00596Q86U02 117 aa25.4■■□□□ 1.66
PABPN1-201ENST00000216727 COQ8AQ8NI60 647 aa25.4■■□□□ 1.66
PABPN1-201ENST00000216727 OR2J1Q9GZK6 312 aa25.4■■□□□ 1.66
PABPN1-201ENST00000216727 CGAP01215 116 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 CTSDP07339 412 aaPredicted RBP25.39■■□□□ 1.66
PABPN1-201ENST00000216727 RAC2P15153 192 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 PGAM2P15259 253 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 TSC22D1Q15714 1073 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 C17orf78Q8N4C9 275 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 RBMXL3Q8N7X1 1067 aaKnown RBP25.39■■□□□ 1.66
PABPN1-201ENST00000216727 EXTL1Q92935 676 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 SEC22AQ96IW7 307 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 HS3ST6Q96QI5 342 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 OR51I2Q9H344 312 aa25.39■■□□□ 1.66
PABPN1-201ENST00000216727 UCP2P55851 309 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 Q6ZS49 121 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 PPP1R1CQ8WVI7 109 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 STARD4Q96DR4 205 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 RAB18Q9NP72 206 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 PROCRQ9UNN8 238 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 MAB21L2Q9Y586 359 aa25.39■■□□□ 1.65
PABPN1-201ENST00000216727 FAM221AA4D161 298 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 SRSF7Q16629 238 aaKnown RBP eCLIP25.38■■□□□ 1.654e-7■□□□□ 8
PABPN1-201ENST00000216727 SLC22A25Q6T423 547 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 SEM1Q6ZVN7 128 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 MFFQ9GZY8 342 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 RHOFQ9HBH0 211 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 UBQLN2Q9UHD9 624 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 AKAP13Q12802 2813 aa25.38■■□□□ 1.65
PABPN1-201ENST00000216727 FAM25EA8MYX2 175 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 CFDP00746 253 aaPredicted RBP25.37■■□□□ 1.65
PABPN1-201ENST00000216727 P2RY6Q15077 328 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 SLC9A3R2Q15599 337 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 C11orf87Q6NUJ2 197 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 Q6ZPA2 131 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 LIME1Q9H400 295 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 OBP2BQ9NPH6 170 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 CRYABP02511 175 aaKnown RBP25.37■■□□□ 1.65
PABPN1-201ENST00000216727 CRHP06850 196 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 FAM76BQ5HYJ3 339 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 GSG1LQ6UXU4 331 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 ZNF546Q86UE3 836 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 MARS2Q96GW9 593 aaKnown RBP25.37■■□□□ 1.65
PABPN1-201ENST00000216727 RTL8AQ9BWD3 113 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 ARL6Q9H0F7 186 aa25.37■■□□□ 1.65
PABPN1-201ENST00000216727 SELEP16581 610 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 CALCRP30988 508 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 SERPINF1P36955 418 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 OR8H3Q8N146 312 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 ZNF610Q8N9Z0 462 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 SLC25A40Q8TBP6 338 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 MICU1Q9BPX6 476 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 NMES1Q9C002 83 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 SPACA1Q9HBV2 294 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 ZNF71Q9NQZ8 489 aaPredicted RBP25.36■■□□□ 1.65
PABPN1-201ENST00000216727 J3QT63 122 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 WDR1O75083 606 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 PTGER4P35408 488 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 CYCSP99999 105 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms