RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Fscn3Q9QXW4 498 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 TinagQ9WUR0 475 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zfp68Q9Z116 606 aa18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Tet1Q3URK3 2007 aaKnown RBP18.39■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Klk1b3P00756 261 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Pla2g2cP48076 150 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Nr4a2Q06219 598 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm9758Q80ZT2 255 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Cggbp1Q8BHG9 167 aaKnown RBP18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 NaxeQ8K4Z3 282 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Slc25a28Q8R0Z5 364 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Eps8l3Q91WL0 600 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Mrpl13Q9D1P0 178 aaKnown RBP18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gstz1Q9WVL0 216 aa18.38■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Marveld1Q7TQJ1 173 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr1113Q7TR54 326 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zmynd11Q8R5C8 602 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr1450Q8VF19 325 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr1347Q8VF33 319 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr494Q8VG07 314 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr1346Q8VGH6 313 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Sfxn3Q91V61 321 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Rpl14Q9CR57 217 aaKnown RBP18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Q9DAN9 164 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zfp111Q9R164 701 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Igkv5-37A0A140T8N4 115 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zfp995E9Q6M3 437 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 3110021N24RikJ3QMN2 152 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Tmprss11bQ14C59 416 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Cd55bQ61476 407 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Sema6dQ76KF0 1073 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Faap24Q8BHL6 221 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 MastlQ8C0P0 865 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 PaxxQ8K0Y7 205 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr518Q8VEW1 333 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr54Q8VFE6 313 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr796Q8VGJ1 310 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr578Q8VH17 313 aa18.37■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Myo7bQ99MZ6 2113 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Igkv12-89A0A0G2JGW8 112 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Igkv13-84A0A140T8N3 115 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm14444A2ARW3 426 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Vmn1r91E9PZR7 307 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 C2cd4aE9Q861 334 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zfp977L7N2E7 438 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Sstr5O08858 362 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Atpif1O35143 106 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Ear3O35290 156 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Ube2nP61089 152 aaKnown RBP18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Msrb2Q78J03 175 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Pik3ip1Q7TMJ8 264 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr890Q7TRD9 314 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 NelfaQ8BG30 530 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Adgrg7Q8BM96 785 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Pqlc2Q8C4N4 293 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr483Q8VG05 315 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr1122Q8VGT9 326 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Plekha3Q9ERS4 297 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Adamdec1Q9R0X2 467 aa18.36■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Vmn2r113E9PZA6 856 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Efna4O08542 206 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Pnliprp2P17892 482 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Olfr331Q5NC44 324 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Znf260Q62513 407 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 GldnQ8BMF8 549 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Vmn1r179Q8R2B4 323 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Defb6Q91VD6 63 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Ykt6Q9CQW1 198 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Dnmt3lQ9CWR8 421 aaKnown RBP18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gpx2Q9JHC0 190 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Trank1Q8BV79 2999 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm42372A0A1B0GT27 204 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm5478D3Z6R0 159 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zmat3O54836 290 aaKnown RBP18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Hoxb2P0C1T1 354 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Cd82P40237 266 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Hes5P70120 167 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Otx1P80205 355 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Mpzl1Q3TEW6 270 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Prss43Q76HL1 382 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Alkal2Q80UG6 151 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Fate1Q8CEK7 99 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Fcrl1Q8R4Y0 343 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 NpntQ91V88 561 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 AspnQ99MQ4 373 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Q9DAZ5 108 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Alg5Q9DB25 324 aa18.35■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Dcst2A0A140LIJ0 701 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Gm15091B1AZM2 449 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Hdac3O88895 424 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Zfp13P10754 512 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 BlkP16277 499 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Cma1P21844 247 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Dnase2P56542 353 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Pip5k1aP70182 546 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Taf9bQ6NZA9 249 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Bhlhe23Q8BGW3 223 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Foxj3Q8BUR3 623 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 NdnfQ8C119 568 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Egln1Q91YE3 400 aa18.34■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms