RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Clec2hQ8C1T8 218 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Nfam1Q8R4V1 264 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr1122Q8VGT9 326 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Sectm1aQ921W8 192 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Gje1Q9CX92 205 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 HikeshiQ9DD02 197 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Aqp9Q9JJJ3 295 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Trav10nA0A075B622 114 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Trav10A0A075B642 114 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Gm15737D3YZR0 106 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Id4P41139 161 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Mbl2P41317 244 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Scarb1Q61009 509 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Kyat3Q71RI9 455 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 NarflQ7TMW6 476 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr1113Q7TR54 326 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Esco2Q8CIB9 592 aaKnown RBP14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Gtf2f2Q8R0A0 249 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Vmn1r229Q8R2A9 306 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Fam110cQ8VE94 421 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr1347Q8VF33 319 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Siglec5Q920G3 569 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 GgactQ923B0 149 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr887Q9EQA6 309 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 FcrlsQ9EQY5 509 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 LitafQ9JLJ0 161 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Gm26992S4R1A3 76 aa14.54□□□□□ -0.08
Shh-201ENSMUST00000002708 Tns1E9Q0S6 1888 aaKnown RBP14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 SvilQ8K4L3 2170 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Ighv1-54A0A075B5W5 117 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Gm8126E9Q1N7 198 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Zfp961E9Q4R5 444 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Obox6G3X9U1 347 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Tcte3P11985 191 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Hsd17b8P50171 259 aaKnown RBP14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Dok1P97465 482 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Mapk3Q63844 380 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Coq3Q8BMS4 370 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 CytipQ91VY6 359 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Mrpl28Q9D1B9 257 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Chrm2Q9ERZ4 466 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Ca14Q9WVT6 337 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Gm28102A0A087WQL3 222 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Gm5458L7N219 204 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 AF067061O70616 171 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Cldn18P56857 264 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Cpeb1P70166 561 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 KcnrgQ2TUM3 264 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Spc25Q3UA16 226 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr350Q8VFP8 312 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Mcts2Q9CQ21 181 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Nkain1Q9D035 207 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Adh4Q9QYY9 377 aa14.53□□□□□ -0.08
Shh-201ENSMUST00000002708 Avpr2O88721 371 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Gm10881P01642 115 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Igf2P09535 180 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 MyogP12979 224 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 VtnP29788 478 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Cpt2P52825 658 aaKnown RBP14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Galr1P56479 348 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr3Q60879 313 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Tmem230Q8CIB6 120 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Vmn1r37Q8R2E4 302 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Lrrc61Q8R2R5 259 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Olfr46Q8VGJ4 318 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Arl4dQ99PE9 201 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Q9DAS2 200 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Znf319Q9ERR8 581 aa14.52□□□□□ -0.08
Shh-201ENSMUST00000002708 Bdp1Q571C7 2467 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Gm4881A0A140LIR9 352 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr1089A0A1L1SRK6 311 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr199F6ZUS0 308 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 DffbO54788 344 aaKnown RBP14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 P01638 115 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Sod1P08228 154 aaKnown RBP14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Zfp27P10077 819 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Rab22aP35285 194 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 InmtP40936 264 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Sirt6P59941 334 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Trim63Q38HM4 350 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 TrmoQ562D6 431 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr5Q60889 312 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Reep4Q8K072 257 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Vmn1r35Q8R2E2 296 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Dtx2Q8R3P2 619 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Calhm2Q8VEC4 323 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Gdpd3Q99LY2 330 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Gpx8Q9D7B7 209 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Rep15Q9D7T1 230 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 SelenofQ9ERR7 162 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 PtprbB2RU80 1998 aa14.52□□□□□ -0.09
Shh-201ENSMUST00000002708 Zfp955bL7N232 545 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 Rap1aP62835 184 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 Zdhhc8Q5Y5T5 762 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 Defa-rs10Q64263 91 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 Lrfn4Q80XU8 636 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 TMEM229BQ8BFQ2 167 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 Vmn1r73Q8R293 303 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 C8gQ8VCG4 202 aa14.51□□□□□ -0.09
Shh-201ENSMUST00000002708 Brinp1Q920P3 760 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms